Gene Information

Name : SSIL_3816 (SSIL_3816)
Accession : YP_006468890.1
Strain :
Genome accession: NC_018069
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4197 - 6329 bp
Length : 2133 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGAGCAACAAGGCAAATTAACAGAAGAAGAAATGAAAACCTATCGTGTTCAAGGGTTTACTTGTACTAATTGTGC
AGCTATTTTTGAAAGTAACGTTAAAGGTTTACCAGGTGTTGAGGATGCAAAGGTTAATTTTGGTGCATCTAAAGTGTATG
TGAAAGGCGATGCAACAATTGAGGAACTAGAAAAAGCAGGAGCATTTGAGAATTTAAAGATTCGGGATGAAAAAGAACAA
AAAGTGGAACGTGAACCATTCTGGAAGCAAAAAGAAAATATTAAGGTTTATATTTCAGTCGTTTTGCTTGTGATTAGTTG
GTTTTTAGGGGAGCAATATGGAGAAGAACATATCCTTCCAACAATCGGTTATGCAGCATCTATTTTAATTGGTGGATATT
CGCTATTCATTAAAGGGTTTAAAAATCTAAGCAGATTAAAGTTCGATATGAATACGCTCATGACGATTGCTATTTTAGGA
GCTGCTGTGATTGGTGAATGGGGCGAAGGGGCAATGGTTGTCATTCTGTTCGCTATTAGTGAAGCATTAGAGCGTTATTC
AATGGATAAGGCTCGTCAATCTATTGAATCATTAATGGATATTGCTCCAAAAGAAGCGTTAATTCGCCGTGGAACTGAAG
AAATGATAGTTCATGTTGAAGATATTCAGGTTGGAGATATCATGATCGTAAAACCTGGTCAAAAATTAGCGATGGATGGA
ACAGTTATTAAGGGAACTTCCACGTTAAATCAGGCTGCAATAACTGGAGAAAGTGTTCCAGTAACTAAAACAATAAATGA
TGAGGTCTTTGCGGGAACCTTAAACGAAGAAGGCTTGCTTGAAGTAAAAGTAACAAAACGAGTTGAAGATACGACGCTTT
CGAAAATTATTCATCTTGTAGAAGAAGCACAGGCAGAGCGAGCGCCTTCTCAAGCATTTGTCGATAAATTTGCGAAATAC
TATACACCTGCAATTGTCATTTTGGCTACTTTAATTGCCGTTCTTCCACCACTGTTTGGTGGAGATTGGAGTGAATGGAT
TTATCAAGGTTTAGCAATATTAGTGGTTGGTTGTCCATGTGCTTTAGTTGTTTCAACGCCAGTGGCTGTTGTTACTGCAA
TTGGAAATGCAGCAAAAAACGGTGTCTTAATTAAAGGTGGCATCCATCTAGAAGAAACTGGACACTTAAAAGCGATTGCA
TTTGATAAAACAGGAACTCTTACGAAAGGTGTTCCTGCTGTAACCGATATCGTAACATTTGACGGGAACGAAAATGAATT
ATTGACAATAACAGCAGCCATCGAAAATGGTTCCCAACATCCATTAGCTTCAGCGATTATGAGAAAAGCTGAAGAAAACG
GGTTAAACTTTAAAGGTGTCGTGGTTGAAGAGTTCCAATCTATTACAGGAAAAGGCGTTAAAGCCAAAGTAAATAATGAA
ATGTACTATGTAGGAAGTCCGAATTTGTTTGAAGAAACCCTTCAAAATGGTATTGAAACATCCATTACAGAAAATATTAC
TCGTATGCAAATTCAAGGTAAAACGGTAATGGTTTTGGGAACGGAAAAAGAAATTCTTTCGTTGATTGCCGTTGCAGATG
AAATGAGAGAATCTTCAAAAGAAGTCATCAGTAAACTGAATCATATGGGAGTCGAAACAGTAATGCTTACTGGTGATAAT
CAACGAACAGCAGAAGCCATTGGAAAACAGGTTGGTGTATCAGATATTAAATCCGATTTATTGCCAGAGGATAAATTAAA
CTTTATTAAAAAACTTCGTGAAAAGCATCAGAGTGTGGCAATGGTTGGAGATGGTGTCAACGATGCCCCAGCACTTGCAG
CATCTTCAGTTGGTGTGGCAATGGGTGGTGCTGGAACGGATACAGCGTTAGAAACTGCTGATATCGCATTAATGTCTGAT
GACTTAAGCAAATTACCATATACCATTAAATTAAGCCGTAAAGCTTTAGTCATTATCAAGCAAAATATTACCTTCTCCTT
AGCAATTAAATTAGTAGCATTACTGTTAGTTATGCCTGGTTGGTTAACGCTATGGATCGCAATATTTGCTGATATGGGCG
CAACACTGCTTGTAACGTTAAACAGTTTAAGGTTATTGAGAGTTAAAGAATAA

Protein sequence :
MSEQQGKLTEEEMKTYRVQGFTCTNCAAIFESNVKGLPGVEDAKVNFGASKVYVKGDATIEELEKAGAFENLKIRDEKEQ
KVEREPFWKQKENIKVYISVVLLVISWFLGEQYGEEHILPTIGYAASILIGGYSLFIKGFKNLSRLKFDMNTLMTIAILG
AAVIGEWGEGAMVVILFAISEALERYSMDKARQSIESLMDIAPKEALIRRGTEEMIVHVEDIQVGDIMIVKPGQKLAMDG
TVIKGTSTLNQAAITGESVPVTKTINDEVFAGTLNEEGLLEVKVTKRVEDTTLSKIIHLVEEAQAERAPSQAFVDKFAKY
YTPAIVILATLIAVLPPLFGGDWSEWIYQGLAILVVGCPCALVVSTPVAVVTAIGNAAKNGVLIKGGIHLEETGHLKAIA
FDKTGTLTKGVPAVTDIVTFDGNENELLTITAAIENGSQHPLASAIMRKAEENGLNFKGVVVEEFQSITGKGVKAKVNNE
MYYVGSPNLFEETLQNGIETSITENITRMQIQGKTVMVLGTEKEILSLIAVADEMRESSKEVISKLNHMGVETVMLTGDN
QRTAEAIGKQVGVSDIKSDLLPEDKLNFIKKLREKHQSVAMVGDGVNDAPALAASSVGVAMGGAGTDTALETADIALMSD
DLSKLPYTIKLSRKALVIIKQNITFSLAIKLVALLLVMPGWLTLWIAIFADMGATLLVTLNSLRLLRVKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 65
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 64
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSIL_3816 YP_006468890.1 cation transport ATPase BAC0298 Protein 7e-113 47
SSIL_3816 YP_006468890.1 cation transport ATPase BAC0092 Protein 4e-97 43
SSIL_3816 YP_006468890.1 cation transport ATPase BAC0124 Protein 2e-88 41