|
Name : Desaci_4689 (Desaci_4689) Accession : YP_006468849.1 Strain : Desulfosporosinus acidiphilus SJ4 Genome accession: NC_018068 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : 3.6.1.- Position : 4891934 - 4893268 bp Length : 1335 bp Strand : - Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase DNA sequence : ATGGAACTAATAAAAGTTCCACCGCAGAACTTAGAAGCTGAGCAGGCAGTCTTAGGGGCTATGATGCTTGAACCTGAATC CGGCAGTTCTGTTTTTGAATTACTTCAAGCCGATGATTTTTATCGGGATAATCATCGTTTGATTTTTGCAGCCATTCGTG AGCTCTTTGAAAAAGGAGCCCCTATCGACCTTGTAAGCGTTGCGGAAATCCTGCGCCAGCAGGGGCGATTAGATCAGGTT GGCGGTATTGCTACAATTTCTGAGATTGCCCGTTCGGTGCCGTCGGCAGCCAACGTAGAGTATTATTCCAGGATAGTTAG TGAAAAAGCGCTTTTGCGCCAGCTTATACAAGTGACCGGCAGCATTTTTGAACGGGGTTATGAACCCGGCGAAGAAGCGA AAACGCTTCTTGAAGAAGCGGAAAGGTTAATACTTGATCTCTCACGCAGACGAGTTAAAGATGGTTTTAGCATAATCAGG GATGTTCTTTTAGATACCTTCGAGAAAATCGAATATCTTTATGCTAATAAAGGAAATCTAACCGGGATTCCAACCTTTTT TACAGAGTTGGATCGAATGACTTCTGGATGGCAGCCCTCAGATCTGGTGATTATTGCTGCCCGTCCATCCATGGGTAAAA CAGCATTGGTTTTAAACATGGCTCAAAACGCTGCAGTTCGGGGTAAAGTTCCCGTGGCGATTTTTAGTCTGGAAATGTCT AAAGAACAGTTAGTACAAAGAATGCTCTGTGGTGAGGCGATGGTTGATCAGCAGCGCGTCAGGACGGGCGATTTATTGGA TGCAGATTGGCCAAAGCTGACCCGAGCGGTGGGACCTTTGTCTGAAGCCCCCATTTTTATTGACGATACCGTAGGAATTT CCTTAGCAGAGCTGCGTTCAAAGGCTCGGCGCCTAAAAACGGAGCATGATCTAGGCATGATTATTATTGACTATTTACAG TTGCTGTCTGTAGGAAAACGATCAGAAAGCCGACAACAAGAAGTTGCACAGATCTCGAGATCGCTTAAAGGGCTTGCACG GGAACTCAAAGTTCCGGTAATTGCCTTATCTCAGCTTAACCGGGGTGTGGAACAACGACAAGATAAACGCCCGATTATGT CCGACTTATTAGAGTCCGGAGCCATTGAGGCTGATGCCGATGTTATATCTTTCATTTATAGGGACGAATATTATAATCAG GAATCAGAAAAAAAGGGTATTGCAGAGTTAATCATAGCTAAGCATCGTAATGGTCCTGTGGGGACCGTAGAATTGGGTTT CTTGAAAGAATTTACTAAATTCGTAAATCTTGATCGTCAACACCAAGTGCAATAA Protein sequence : MELIKVPPQNLEAEQAVLGAMMLEPESGSSVFELLQADDFYRDNHRLIFAAIRELFEKGAPIDLVSVAEILRQQGRLDQV GGIATISEIARSVPSAANVEYYSRIVSEKALLRQLIQVTGSIFERGYEPGEEAKTLLEEAERLILDLSRRRVKDGFSIIR DVLLDTFEKIEYLYANKGNLTGIPTFFTELDRMTSGWQPSDLVIIAARPSMGKTALVLNMAQNAAVRGKVPVAIFSLEMS KEQLVQRMLCGEAMVDQQRVRTGDLLDADWPKLTRAVGPLSEAPIFIDDTVGISLAELRSKARRLKTEHDLGMIIIDYLQ LLSVGKRSESRQQEVAQISRSLKGLARELKVPVIALSQLNRGVEQRQDKRPIMSDLLESGAIEADADVISFIYRDEYYNQ ESEKKGIAELIIAKHRNGPVGTVELGFLKEFTKFVNLDRQHQVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-68 | 43 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 7e-78 | 42 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-67 | 41 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 8e-72 | 41 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-72 | 41 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-56 | 41 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-69 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-69 | 41 |
