Gene Information

Name : Desaci_4384 (Desaci_4384)
Accession : YP_006468560.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4540750 - 4541445 bp
Length : 696 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
GTGGGAAACAAAATAGTATTAGTGGATGATGAGGCTGAAATTCTATCCCTCGTGCGGGACTATCTCACGCGGGATGGTTT
TACGGTTGTGACAGCGCTTAATGGAGTGGAAGGAATGGAATTGATTGAAAAGGAAAAACCGGATTTGGTGCTGCTTGATT
GGATGCTGCCGGGAATGAGCGGGTTAGAGATGTGCAAGCGTCTGCGTGAAACAAGCACCATCCCAATCATTATGCTGACA
GCCAAGTCAGAGGAGATAGACCGTGTTTTAGGTCTTGAGTTCGGAGCAGACGATTATATTGTAAAACCCTTTAGTTTAAG
GGAGTTGGCAGCACGCATCAAAACCGTGCTGCGGAGATCTTCCGGAGGGGCTCAGGAGACATCAAACTCCTCCCTTCTCA
TTCGCGGGGAACTAACAATAGATGTGACAAGTCATAAAGTGACGAAAAGGGGACAAGAACTATTCCTTACCCCCACGGAG
TTTAATATTTTGCATTTATTAGCCTTGCGCCCGGGTACTGTTTACAGCCGGCTTCAGCTTTTACGTCAGGCCATGGGAGA
GGAATATCTTTATTATGAACGATCCATTGATACCCATGTATCGAACCTGCGTAAAAAAGTCGAAGATAACCCAAGCGATC
CCAAATATATCGAAACGGTGTTTGGAGTCGGGTATCGGTTTGGTGAGGACCTATGA

Protein sequence :
MGNKIVLVDDEAEILSLVRDYLTRDGFTVVTALNGVEGMELIEKEKPDLVLLDWMLPGMSGLEMCKRLRETSTIPIIMLT
AKSEEIDRVLGLEFGADDYIVKPFSLRELAARIKTVLRRSSGGAQETSNSSLLIRGELTIDVTSHKVTKRGQELFLTPTE
FNILHLLALRPGTVYSRLQLLRQAMGEEYLYYERSIDTHVSNLRKKVEDNPSDPKYIETVFGVGYRFGEDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-40 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 6e-41 48
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 3e-40 47
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 3e-42 45
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 3e-42 45
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 2e-41 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 3e-41 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 3e-41 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 9e-39 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 9e-39 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-38 44
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 4e-39 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF130997.1.orf0.gene Protein 4e-35 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001485.1.gene721.p Protein 3e-33 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 1e-32 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 1e-32 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 1e-32 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 7e-41 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 7e-41 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 1e-36 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 3e-41 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 9e-41 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 9e-41 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 8e-41 43
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 8e-39 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-35 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 4e-38 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 2e-32 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 2e-32 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 1e-35 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 5e-37 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 8e-40 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 1e-40 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 1e-27 42
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 1e-36 41
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 2e-40 41
Desaci_4384 YP_006468560.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 3e-40 41