Gene Information

Name : Desaci_4358 (Desaci_4358)
Accession : YP_006468534.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4508440 - 4509165 bp
Length : 726 bp
Strand : -
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH

DNA sequence :
ATGGAACGTTCATATGATCGGGCTGCAGATGTTCTGCGCCCTGTTAAAATTTCGCGACGCTTTACTAAGGCCCCGGAAGG
TTCGGTACTCATTGAAATTGGGGACACGCGGGTTTTATGTACTGCCAGTGTAGAAGAAAAGGTGCCTCCTTTTCAAAAAG
GGACGGGAAAAGGCTGGGTAACCGCGGAATATTCAATGATTCCCAGGGCTACTCAGAGTCGAACTCAGCGTGAGGCGACT
AAAGGGAAGCTTACCGGTCGAACTATGGAAATCCAGCGCTTAATCGGCCGCGCACTGCGTTCGGTTGTTGACCTGAAAAA
GCTAGGTGAACGCACAATCTGGCTGGACTGTGATGTGCTGCAGGCAGACGGCGGGACACGGACTGCTTCTATTACCGGAG
CATATGTTGCCTTAACCGACGCAGTGCAATATTTAATGAATAACAAACTATTAAAAACAAACCCCATTACTGACACCTTA
GCCGCTGTTTCGGTTGGCAAGGTTCTGGGAAATCAAATATTGGACTTGGACTATGTGGAAGATTCCAAAGCAGAAGTCGA
TATGAACGTAGTTATGACCGGGTCAGGAAAATTCGTGGAAATTCAAGGAACTGCTGAAGAAATTCCTTTTGATCGAGCGG
ATTTGAATGTATTTCTGGAGCTCGCTGAAAAGGGAATCCGTACATTGATGGAAGTTCAAAAGACAGCCTTGGAGACAACC
TCATGA

Protein sequence :
MERSYDRAADVLRPVKISRRFTKAPEGSVLIEIGDTRVLCTASVEEKVPPFQKGTGKGWVTAEYSMIPRATQSRTQREAT
KGKLTGRTMEIQRLIGRALRSVVDLKKLGERTIWLDCDVLQADGGTRTASITGAYVALTDAVQYLMNNKLLKTNPITDTL
AAVSVGKVLGNQILDLDYVEDSKAEVDMNVVMTGSGKFVEIQGTAEEIPFDRADLNVFLELAEKGIRTLMEVQKTALETT
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-67 59