Gene Information

Name : Desaci_4271 (Desaci_4271)
Accession : YP_006468454.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4412917 - 4413270 bp
Length : 354 bp
Strand : -
Note : PFAM: IS66 Orf2 like protein

DNA sequence :
GTGTTAGATGTCACACGCGCTGCGCACGTGTATCTGGCCTGCGGCTACACAGACCTACGGCGGGGCATTGACGGACTGGC
AGCTATGGTTCAGCAACGCTTTCAGCTTGACCCCTTCTCGGACAGTCTGTTTCTGTTCTGCGGCCGGAGAACCGACCGTA
TTAAAGCGCTCTACTGGGAGGAAGACGGGTTCGTGCTTCTGTATAAGCGGTTGGAGAACGGGCGTTTCCAATGGCCGAGA
ACCCCGGAAGACGTCCGTGTACTCACGGAGCAGCAGTTCCGCTGGCTCATGGAAGGACTCTCCATCGACCAGCCCAAAGC
CCTGCGTCCGATGAAGGATTTGAGTATTGTTTAG

Protein sequence :
MLDVTRAAHVYLACGYTDLRRGIDGLAAMVQQRFQLDPFSDSLFLFCGRRTDRIKALYWEEDGFVLLYKRLENGRFQWPR
TPEDVRVLTEQQFRWLMEGLSIDQPKALRPMKDLSIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-18 45
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-16 45
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-16 45
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 2e-15 44
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 6e-12 42
unnamed AAL99258.1 unknown Not tested LEE Protein 1e-14 42
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-14 42
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 1e-14 42
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-14 42
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 1e-13 42
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 1e-13 42
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-14 42
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 3e-14 42
unnamed AAC31493.1 L0014 Not tested LEE Protein 1e-14 42
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-14 42
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 1e-14 42
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-14 42
unnamed AAL08461.1 unknown Not tested SRL Protein 3e-14 41
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 2e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_4271 YP_006468454.1 transposase VFG1665 Protein 8e-16 44
Desaci_4271 YP_006468454.1 transposase VFG1517 Protein 2e-12 42
Desaci_4271 YP_006468454.1 transposase VFG0792 Protein 5e-15 42
Desaci_4271 YP_006468454.1 transposase VFG1698 Protein 8e-15 42
Desaci_4271 YP_006468454.1 transposase VFG1709 Protein 5e-15 42
Desaci_4271 YP_006468454.1 transposase VFG1052 Protein 1e-14 41