Gene Information

Name : Desaci_4190 (Desaci_4190)
Accession : YP_006468382.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4338167 - 4338844 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGAATCAGGTCATTGTTACGCAGAATTTATTCAAGGCTTATACCATGGGAACCTTAAATGTTGAGATTTTAAAAGACAT
CAATATTTCTATTAATAAGGGCGAATTCGTATCGATCATGGGGCCTTCAGGTTCAGGCAAAAGCACACTGCTTTATCTGT
TAGGCGGACTTGATAGACCCACTTCCGGCAGTATAAAAATTAATGACAAAGAGCTATCAAGCATGTCGGATAAAGCAGAG
AGTGCCATGAGACGAAGAGATTTAGGGTTTGTTTTTCAGTTTTACAATCTAGTTCCAAATCTTAGTGTCGAAGAAAATGT
ATTATTGCCCATCTTATTAGACGGGAAAAAGGCCAAAAAATATCACGAACGTTTAAAAGAGCTTCTTGAGTTGATTGGAC
TTGCCGATAGAAAAAATCACACACCGAGAGAACTCTCCGGCGGGCAGCAGCAGAGGGTAGCTATAGCCAGAGCCTTAATT
AATGATCCTGAGATTATCTTAGCGGATGAACCGATAGGGAACTTGGACAGTAAAACAGGAATAGAAGTTATGAGGTTGCT
TAAAAGAATTAATTTAGAAAAGTCTAAGACAATCATTCAGGTTACCCATTCAAGTGAATCAGCAGAATACGGGAATAGAA
CGATTAATTTGCTCGATGGAAGGGTGTGTCAACAATAA

Protein sequence :
MNQVIVTQNLFKAYTMGTLNVEILKDINISINKGEFVSIMGPSGSGKSTLLYLLGGLDRPTSGSIKINDKELSSMSDKAE
SAMRRRDLGFVFQFYNLVPNLSVEENVLLPILLDGKKAKKYHERLKELLELIGLADRKNHTPRELSGGQQQRVAIARALI
NDPEIILADEPIGNLDSKTGIEVMRLLKRINLEKSKTIIQVTHSSESAEYGNRTINLLDGRVCQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-27 41
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 9e-30 41
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 9e-32 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-37 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_4190 YP_006468382.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 5e-45 51
Desaci_4190 YP_006468382.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-46 51
Desaci_4190 YP_006468382.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 8e-46 47
Desaci_4190 YP_006468382.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 1e-37 45
Desaci_4190 YP_006468382.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 5e-37 43