Gene Information

Name : Desaci_4054 (Desaci_4054)
Accession : YP_006468251.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4217468 - 4217995 bp
Length : 528 bp
Strand : -
Note : PFAM: Resolvase, N terminal domain

DNA sequence :
ATGAACGGTCACTCATTCGGCTATATTCGCGTGAGTACCTTCGATCAAAACACTAGCCGTCAATTAGATGGGTTAATCAT
GGATCGAGTGTTCATTGATAAAGCCTCTGGTAAAGATACCCACCGCCCTGAACTGGAAAACTTAAAACAATTTGTTCGTG
ATGGTGATACTGTCGTTGTCCATAGTATGGATAGACTTGCCCGTAATTTGGATGACTTACGTCAAATTGTTTGTAGTCTT
ACACAAAAAGGCGTTAAAATTCAGTTCATGAAGGAAAATCTTACTTTTTCCGGCTATGACTCGCCGTTGGCTAACTTGCA
GTTATCGGTCATGGGAGCTTTTACCGACTTTGAACGCTCCATGATCCGCGAACGACAATTGGAAGGTATCGCGCTAGCTA
AACAACGAAGTGGCTATACTGGCAGGAAAAAAGGGTTAACGGATGATCAGATTGTTCATATTAAGCAAAGGGTTGCTTCC
GGCGAAAAAAAGTCTCAGATCGTTCGTTATTTTGGGATTAGCAGGTAA

Protein sequence :
MNGHSFGYIRVSTFDQNTSRQLDGLIMDRVFIDKASGKDTHRPELENLKQFVRDGDTVVVHSMDRLARNLDDLRQIVCSL
TQKGVKIQFMKENLTFSGYDSPLANLQLSVMGAFTDFERSMIRERQLEGIALAKQRSGYTGRKKGLTDDQIVHIKQRVAS
GEKKSQIVRYFGISR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-56 67
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-56 67
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 5e-56 67
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 7e-56 67
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 6e-56 65
res YP_005124341.1 DNA-invertase Not tested Not named Protein 2e-26 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_4054 YP_006468251.1 site-specific recombinase, DNA invertase Pin VFG1030 Protein 1e-56 67