Gene Information

Name : Desaci_3899 (Desaci_3899)
Accession : YP_006468107.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4057366 - 4058058 bp
Length : 693 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAGAATCTTACTCGTTGATGATGAAAAGAAAATCATCACAGTTCTTAAAGCCTACCTACAACAAGAAGGCTTCCAAGT
AACTACCGCCCTTAACGGGCTAATTGCTCTGACGCTATTTAAGGAGAACACTTACGATCTAATTATCCTCGATTTGATGC
TTCCCGGTATGTCCGGTATAGAGATTTGTCGTGAAATCCGTAAAATATCCTCCGTCCCTATCATAATGCTCACGGCAAAA
GTCGAAGAAGAAGACCGTATTCAAGGCTTGGGCATCGGTGCAGATGATTACATTACCAAACCCTTCAGCCCACGCGAAGT
AGTCGCTCGGGTTCGTGCTGTTTTACGTCGGGTGAATAACGAAACCACTCCACTTGCAGACATGATTTCCTATAACAACG
GTCTGACTATAGACAATATTCAACATGAGGTTCGCCTTCATGATCAAGTAGTTCCACTCACTCCAACCGAGTTTAAGATT
CTGGGGGCCTTGGCTAAGCATCCTGGACGGGTATACTCCCGTGGACAGCTGGTTGAAATTGTTCAAGGACATGACTTTGA
AGGAGATGATCGCGTGATTGATGCTCATATTAAAAAAATCCGGCAAAAAATCGAGCTTTCCCCAAGTGACCCGCGTATTA
TTCTCACTGTTTACGGAGTGGGCTATAAGTTCAATCCCAATCCGGAGCTGTAA

Protein sequence : 
MRILLVDDEKKIITVLKAYLQQEGFQVTTALNGLIALTLFKENTYDLIILDLMLPGMSGIEICREIRKISSVPIIMLTAK
VEEEDRIQGLGIGADDYITKPFSPREVVARVRAVLRRVNNETTPLADMISYNNGLTIDNIQHEVRLHDQVVPLTPTEFKI
LGALAKHPGRVYSRGQLVEIVQGHDFEGDDRVIDAHIKKIRQKIELSPSDPRIILTVYGVGYKFNPNPEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-37 47
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 7e-40 45
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 1e-40 45
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 1e-40 45
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 1e-33 45
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 1e-31 45
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain EU250284.1.orf4.gene Protein 5e-31 45
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 9e-35 45
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 6e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 6e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 8e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 8e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 8e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 8e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-33 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 8e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 8e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 8e-34 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF130997.1.orf0.gene Protein 2e-30 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 1e-33 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 2e-33 44
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 1e-35 43
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 1e-36 43
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 6e-36 43
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 1e-36 43
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 7e-37 43
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 6e-36 43
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 7e-30 42
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 7e-30 42
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 2e-30 42
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 3e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3899 YP_006468107.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 3e-38 41