Gene Information

Name : Desaci_3816 (Desaci_3816)
Accession : YP_006468029.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3976222 - 3976989 bp
Length : 768 bp
Strand : -
Note : PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP

DNA sequence : 
GTGCATTCTTCAAGCAGACTCATCGGACTTTTAGAACGCGGAATTCCTTTGTTTTTGGCTGTGGCATTCTTGATCCTGGC
AACTCCGAAGAGTGTTTTCGCTGCCGGGGTTACATTGGATCTTGGAAATTCCACCTCTCAGCAATTGAGTACATCCCTGC
AGCTTTTAATGACGTTAACGGTATTAAGTGTGGCTCCGGCAATACTGTTGTTGATGACGTCCTTTACGCGTATCGTTATT
GTCCTATCCTTCGTCAGAAATGCTCTGGGAACCCAGCAGCTCCCTCCCAATCAAGTTCTTGTAGGGTTAGCTCTCTTTCT
TTCCTTCTTTGTCATGGCTCCTACATGGAATCAAATTAATACGAATGCGATCCAACCCTATATGAAGAACCAGATTACGC
AAACAGAGGCTTTAACTAAGGCTGAAGAGCCTTTAAGAGATTTTATGTTCAAACAGACTCGGGAAAAAGACTTGGAGCTT
TTTGTGGGTTTAGCTAAAATGGAGCGGCCTAAAACTTACCGGGATATTCCAACGTATGTACTGATTCCTGCTTTTGTTAT
CAGCGAATTAAAAACGGCGTTCCAGATGGGATTTGCGATATTTATTCCGTTTATGGTTATCGATATGATTGTTTCAAGTA
CCCTAATGTCTATTGGTATGATGATGCTTCCTCCGATGATGATCTCCCTGCCATTTAAAATACTTTTATTTGTCCTGGTG
GATGGCTGGCATTTGGTGGTACAGTCCTTGGTGACCAGTTTTAAATAA

Protein sequence : 
MHSSSRLIGLLERGIPLFLAVAFLILATPKSVFAAGVTLDLGNSTSQQLSTSLQLLMTLTVLSVAPAILLLMTSFTRIVI
VLSFVRNALGTQQLPPNQVLVGLALFLSFFVMAPTWNQINTNAIQPYMKNQITQTEALTKAEEPLRDFMFKQTREKDLEL
FVGLAKMERPKTYRDIPTYVLIPAFVISELKTAFQMGFAIFIPFMVIDMIVSSTLMSIGMMMLPPMMISLPFKILLFVLV
DGWHLVVQSLVTSFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-19 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-19 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-19 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-19 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 7e-23 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 5e-14 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 4e-14 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-22 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3816 YP_006468029.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-46 62
Desaci_3816 YP_006468029.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-44 59
Desaci_3816 YP_006468029.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-43 56
Desaci_3816 YP_006468029.1 flagellar biosynthetic protein FliP VFG2494 Protein 5e-43 55
Desaci_3816 YP_006468029.1 flagellar biosynthetic protein FliP VFG0394 Protein 2e-24 43
Desaci_3816 YP_006468029.1 flagellar biosynthetic protein FliP VFG0044 Protein 1e-25 41