Gene Information

Name : Desaci_3744 (Desaci_3744)
Accession : YP_006467957.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3904100 - 3904786 bp
Length : 687 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB

DNA sequence :
GTGGCAACAATTTTAGTAGTGGATGATGAGGAACCTATTCAAGAATTGCTCAGGTTTAACCTTGAAAAAGAGGGATATCA
GGTTCGGGTAGCTAAAGATGGCCCGGAAGCCTTGGCAAATCTTGAGAAGGAACAGCCCGATTTGCTTGTCCTCGATGTCA
TGCTGCCTGGTATGGATGGCTTAGAGGTATGTCGCAGACTTAGATTAAATCCTAAGTATCAGCAATTACCAATTATCATG
TTAACCGCAAAAGGTGAAGAGATTGATAAAGTTTTAGGTTTGGAGCTCGGTGCCGATGATTATATGACTAAGCCTTTCAG
TCCGCGAGAATTGTTGGCAAGAATTAAAGCCCGTTTACGCCGCTTAACTATACCGGAAGATTCTGAGACCATGATTGTAC
GAGGCGAGCTTCGTATCGACATCAGTGGTTTTCGTGTTCTTATTCGTGGTGAAGAAGTTGAGTTGACGCCAAAAGAATTT
GAGCTTTTACGTGTCTTTGCTGCTCATCCCGGAAAAGTCTATTCCAGGGACGAACTTTTGGAGCGAATCTGGGGATATGA
ATATCATGGAGATACCAGAACGGTTGATGTTCATGTGCGTCATTTACGGCTGAAAATAGAACTTGATCCCTCAAATCCAG
AGTACATAGAAACTCTGCGCGGAATTGGCTACCGCTTTAAAGGATAA

Protein sequence :
MATILVVDDEEPIQELLRFNLEKEGYQVRVAKDGPEALANLEKEQPDLLVLDVMLPGMDGLEVCRRLRLNPKYQQLPIIM
LTAKGEEIDKVLGLELGADDYMTKPFSPRELLARIKARLRRLTIPEDSETMIVRGELRIDISGFRVLIRGEEVELTPKEF
ELLRVFAAHPGKVYSRDELLERIWGYEYHGDTRTVDVHVRHLRLKIELDPSNPEYIETLRGIGYRFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-39 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 7e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 6e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 8e-48 54
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-45 53
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 1e-48 52
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 5e-51 52
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 6e-41 49
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-44 49
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 5e-39 45
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-29 43
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 2e-35 43
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 2e-35 43
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 3e-38 43
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 6e-33 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 2e-32 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 2e-34 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 3e-37 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 3e-37 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 2e-32 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_008702.1.4607594. Protein 1e-29 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 3e-20 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 3e-20 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 4e-24 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 1e-31 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 7e-29 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 3e-36 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 1e-33 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 1e-33 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 9e-35 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 4e-33 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 1e-33 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 1e-33 41
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-34 44
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 1e-39 42
Desaci_3744 YP_006467957.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 3e-40 42