Gene Information

Name : Desaci_3620 (Desaci_3620)
Accession : YP_006467833.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3779431 - 3780120 bp
Length : 690 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGATCCAATTCTAATTGTCGATGATGAAGAAAGAATTCGCAGTTTGGTCAGATTATATCTTGAGCGGGAAGGATTTGC
GGTCGAAGAAGCGGAAGATGGCAGCGTCGCCTTAGCGAAGTTTAAAGCGGGCCGGTTTTCCTTATTAATTGTTGATCTCA
TGATGCCTGAAATCGATGGCTGGAGGGTTTGCCGGGAAATACGCGAAAGCTCAGGAATCCCAATCATTATGTTGACAGCC
CGGGGGGAAGAATTTGATCGTGTCTTAGGCCTGGAACTGGGCGCCGATGATTACTTAGTGAAACCCTTCAGTACTAAGGA
ATTAGTCGCCAGAGTCAAAGCACTGCTGCGCCGGTCAAGCGGTCAATTGCATACCGTTTCTTCGGAAATTTCGGTGGGCC
CGCTTAGTATCGATAAAGAAAAACACCGTGTGACGATAGGCGACGAGGCGATCAACTTAACCCCACTGGAATTTGATTTG
CTCTATTTTCTAGCTAAAAATCGGGGAAGAGTTTTTTCGCGGGAGCAGCTTATGGAAACAGTCTGGGGATACGATTTTTA
CGGCGATGCTCGAACTGTCGATACTCATGTGAAAAAACTGCGGGAAAAATTAGCTAACCCCAGCATTAAAAAGATGCTTG
TTACCGTTTGGGGAGTGGGTTATAAATTCGATCCGGATATGGTGTCCTGA

Protein sequence :
MDPILIVDDEERIRSLVRLYLEREGFAVEEAEDGSVALAKFKAGRFSLLIVDLMMPEIDGWRVCREIRESSGIPIIMLTA
RGEEFDRVLGLELGADDYLVKPFSTKELVARVKALLRRSSGQLHTVSSEISVGPLSIDKEKHRVTIGDEAINLTPLEFDL
LYFLAKNRGRVFSREQLMETVWGYDFYGDARTVDTHVKKLREKLANPSIKKMLVTVWGVGYKFDPDMVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-40 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 3e-48 48
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 4e-48 47
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 7e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 5e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 5e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 5e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 5e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 7e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 5e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 5e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 5e-48 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 4e-40 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 3e-32 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 3e-32 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-46 45
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 9e-32 45
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 2e-35 44
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 1e-43 44
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 9e-44 44
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 2e-31 44
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 2e-31 44
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 5e-44 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 5e-39 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 6e-40 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 6e-40 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 5e-43 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 3e-36 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 3e-36 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 1e-36 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 3e-36 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 1e-36 43
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-41 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 3e-42 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 2e-42 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain EU250284.1.orf4.gene Protein 2e-38 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 1e-36 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 8e-36 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000675.2.gene1535. Protein 5e-38 41
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 4e-35 46
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 3e-40 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 1e-39 42
Desaci_3620 YP_006467833.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 8e-36 41