Gene Information

Name : Desaci_3576 (Desaci_3576)
Accession : YP_006467789.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3726705 - 3727403 bp
Length : 699 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAACGAGAAGAAGACGAAAATACTAGTCGTTGAAGATGAAGAATCTATCAGGCGCTTTATTACACTTAACCTATTTGC
AGCCGGATATCAGGTTGATGAAGCAATTACCGGTGAAGAAGCTCTCCCCAAACTGAAGACCTTCTGTCCTGAGGTTGTCG
TTCTTGATCTCATGCTGCCTGGTATTGGCGGCTTGGAAGTTTGTCAACAGATTCGTGTATCTGCACCGGAAACATTGGTA
ATTATCCTGACGGCGAAAGGCCAGGATACTGACAAGATTTTAGGCTTGGAACTTGGTGCTGATGATTATATGGTGAAACC
ATTTAATCCCTTTGAATTAATTGCTCGAATCAAAGCAGTACTTCGAAGGCGGGTTATACCCAAAGAGACAAAACAAGTTA
TAACCTGTGGTGAACTGTGCTTAGATATCACTTCTAACAAATTTTTCAAACAGGAGATTGAGATTGAACTGACTCCTACA
GAATTTTCATTATTAAAAGTATTTATGGAAAACCCAGAGAAGGCGCTTAAGCGCAACGAGATGCTAAATGCTGTCTGGGG
AGAAGATTATTTCGGTGATACTAAAACACTGGATGTGCATATCAGGCGTTTGCGGGAGAAAATAGAGGATAATCCTTCAC
AGCCTGCGTACATTAAGACTGTCTGGGGGTCCGGGTACCGATGGCAGCGGGAGTCTTAA

Protein sequence :
MNEKKTKILVVEDEESIRRFITLNLFAAGYQVDEAITGEEALPKLKTFCPEVVVLDLMLPGIGGLEVCQQIRVSAPETLV
IILTAKGQDTDKILGLELGADDYMVKPFNPFELIARIKAVLRRRVIPKETKQVITCGELCLDITSNKFFKQEIEIELTPT
EFSLLKVFMENPEKALKRNEMLNAVWGEDYFGDTKTLDVHIRRLREKIEDNPSQPAYIKTVWGSGYRWQRES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-37 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-41 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 2e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 2e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-45 45
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 3e-31 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 2e-36 43
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 1e-33 42
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 3e-40 42
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 5e-41 42
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 5e-41 42
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF130997.1.orf0.gene Protein 4e-33 41
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain EU250284.1.orf4.gene Protein 1e-35 41
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 6e-33 41
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 1e-39 41
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 1e-31 41
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 6e-38 42
Desaci_3576 YP_006467789.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 3e-38 41