Gene Information

Name : Desaci_3565 (Desaci_3565)
Accession : YP_006467778.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3714759 - 3715670 bp
Length : 912 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC

DNA sequence : 
GTGTTAGCCGATGAGGCCTTAAGTCTGTTTGCGGGTTATCAATATTCTCTTAATCGCTCAGAACATACGGTCATAGCTTA
TCAAAACGACCTGGGGCAATTTTTTCGTTTTGCGGCTCAGGAGGTTGGGCAAGAACCAGAAAGCCTTACTGTCCAGCAAA
TCGATGTTTATATTGTCCGCAGTTTTTTAGGAATACTGACAGATCAGGGATTAACACGCAAAAGTATGGCTCGTAAACTT
GCTGCCCTAAGATCACTCTTTAAGTTTTTATGCCGGGAAGGGATTCTGTCAGTGAATCCAGTACAACGAATTGCCAGCCC
CAAAATAGGAAAAAAACTCCCGCATTTTCTCTATCTCGATCAAGTTGAAGGATTGCTGCGGGCTTCTGACTGTTCAAAGC
TTCTGGGCGCACGGGATCAAGTCATTATGGAACTACTTTATGGTTCCGGACTTCGAGTCAGTGAGCTTGTCGGTTTAAAT
AGAGATAGTCTTGATTTGGAGGGCGGTCTGATCCGAGTTTTAGGAAAAGGAAATAAAGAAAGAGTAGTGCCGATCACAAA
TTATGCGCGGCGAGCCATTGAAAACTATCTGAAGATGCGCAGCGATGAAAATGGTGCCTTATTGTTAAATTATCAGGGAA
CTCGTTTAACGGATCGTTCTGTCCGCCGTATTTTGGATAAACTAGTGAACAGAGTCTCCTTGGAACAACATGTCCACCCG
CATATGCTCCGCCACTCCTTTGCCACCCATCTTTTAGATGGAGGAGCAGATTTGAGAAGTGTGCAGGAATTGCTGGGGCA
TCAGAAATTATCCTCAACTCAGATTTATACTCATTTGACTCGGGAACGCTTAAAAGACGTTTATGGCAAGGCTCATCCTC
GAGCAAAAACGGTTATTGACCCATTAAAATAA

Protein sequence : 
MLADEALSLFAGYQYSLNRSEHTVIAYQNDLGQFFRFAAQEVGQEPESLTVQQIDVYIVRSFLGILTDQGLTRKSMARKL
AALRSLFKFLCREGILSVNPVQRIASPKIGKKLPHFLYLDQVEGLLRASDCSKLLGARDQVIMELLYGSGLRVSELVGLN
RDSLDLEGGLIRVLGKGNKERVVPITNYARRAIENYLKMRSDENGALLLNYQGTRLTDRSVRRILDKLVNRVSLEQHVHP
HMLRHSFATHLLDGGADLRSVQELLGHQKLSSTQIYTHLTRERLKDVYGKAHPRAKTVIDPLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-39 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-39 43