Gene Information

Name : Desaci_3312 (Desaci_3312)
Accession : YP_006467540.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3451151 - 3452047 bp
Length : 897 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerD

DNA sequence :
ATGACCTCCACTGAAGAGCTTATGAAACAGTACTTAACTTATTTACACGTCGAACGGGGACTTTCCTTGAATACTCGTCA
GGCCTACGAGCGTGACTTGCGTCAGCTTGTTGTTTTTCTGGAACAAAGGGGAACTGATATTTTAACTTGCGAGTCTAATG
ACCTCTTCTTGTTTCTCTTTCAATGGAAAGAACAGGGGAAGTCTCCTCGAAGTATTGCCAGGTGCAATGCAACGTTACGA
GGTTTTTTTGCGTTTCTTTTAGATGAAGGAAAGAGGGTTGATAATCCCAGCGAATATCTTGTAACACCAAAGCTAAATCA
ATCTCTGCCGAAGGTGTTGCCTGAAGGGACAATGGATAGACTATTAAAAATCAGTGAATCAACGGATTATGCTTATCGAG
ATCTTGCAATGCTGGAAATCCTCTATGGCAGCGGCTTGAGGGTCTCGGAATTAATTAATCTCCGTGTCAATGATATATCG
TTGGACGTTGGTTTTATTCGCTGTATAGGTAAAGGAAATAAGGAACGCATTGTTCCTTTGGGAGAACCTGCTATAGAGGC
TGTCAGGAGTTACCTTAATGGCCCAAGAAAGAGAATGTGCTCTAAGACGGCGAGTGATTTTTTATTTTTAAATTCTCACG
GCCGTCCTCTTACTCGTCAAGGAGTATCCTTTATTTTAAATAATTGGGGTGTCTCCCATAATATTGCGAGGAAAGTTTCC
CCACATATGTTTCGACATAGTTTTGCAACTCATTTGCTGGATCACGGCGCTGATTTGCGTTCCGTGCAAGAACTGTTAGG
ACATGCGGACATTTCTACAACTCAGATATACACGCATTTGACAAGAAAACGTTTGTTAGAAGTTTTTAATAAGTCACATC
CCCGTGCTGAGCGGTGA

Protein sequence :
MTSTEELMKQYLTYLHVERGLSLNTRQAYERDLRQLVVFLEQRGTDILTCESNDLFLFLFQWKEQGKSPRSIARCNATLR
GFFAFLLDEGKRVDNPSEYLVTPKLNQSLPKVLPEGTMDRLLKISESTDYAYRDLAMLEILYGSGLRVSELINLRVNDIS
LDVGFIRCIGKGNKERIVPLGEPAIEAVRSYLNGPRKRMCSKTASDFLFLNSHGRPLTRQGVSFILNNWGVSHNIARKVS
PHMFRHSFATHLLDHGADLRSVQELLGHADISTTQIYTHLTRKRLLEVFNKSHPRAER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-49 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-49 45