Gene Information

Name : Desaci_3270 (Desaci_3270)
Accession : YP_006467498.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 1.8.-.-
Position : 3413693 - 3414268 bp
Length : 576 bp
Strand : -
Note : PFAM: 4Fe-4S binding domain

DNA sequence : 
ATGACAGTTCGCATGGGATTTGTCATTATCACTTCGCGCTGTATCGACTGTGATGCCTGTATGGTCGCATGCCGCGCCGA
AAATGACGTGCCCATTGGTAAAACGCGCAATTGGGTCAAAAGCAGTGGTGTTCAGGGTAAGTTCCCAAAGATTACAGAAG
TTTTTCAACCGGGAAATTGTATGCATTGTGACAACCCTCCTTGCGTTTCGGTATGTCCTACCGGAGCATCTCAAAAACGT
TCCGATGGTATTGTCATTGTTGAAAACAGTAAATGTATCGGCTGCAAATATTGTCTTACTGCTTGCCCTTATGATGCTCG
TTTTGCCAATCCGGAGACAGGTAAAGCGGATAAATGCACCTTTTGTCTGCAGCGTTTGGAAGAAGGCTTAAAGCCTGCCT
GTGTTCAGACTTGTCTTGGAAAATCACGGCAAGCCGGTGATCTCAATGACCCGGACAGTGTCGTAGCCAAATTAATTGCC
AAATATCCTGCCCGTCAGCTTTTGAAGTATGTGGGAACAGGCCCCAATATTTATTACATTGATGACGTCGTCCCGGAAAT
ACCGGAGGGCAAATAG

Protein sequence : 
MTVRMGFVIITSRCIDCDACMVACRAENDVPIGKTRNWVKSSGVQGKFPKITEVFQPGNCMHCDNPPCVSVCPTGASQKR
SDGIVIVENSKCIGCKYCLTACPYDARFANPETGKADKCTFCLQRLEEGLKPACVQTCLGKSRQAGDLNDPDSVVAKLIA
KYPARQLLKYVGTGPNIYYIDDVVPEIPEGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-38 48
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-38 48
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 6e-38 48
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 6e-38 48
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 4e-38 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_3270 YP_006467498.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 2e-38 48