Gene Information

Name : Desaci_2682 (Desaci_2682)
Accession : YP_006466946.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2801667 - 2803178 bp
Length : 1512 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase

DNA sequence :
ATGATGCATAATATCTTAAAAAACCTGAAACAATCAACAGACGGAACCTTTCTAATGTTTATCGATGGTGAGTGGGTTTC
ATCCTCCGGCGGGAAAACTCAAGAACTCTACAACCCTGCAACCGGTGAAGCCATTGGCTCGGTAGCATTTGGATCAGAAG
AAGATGCGGAGCGAGCGATTCGTGCCGCAAGACGTGCTTTTGATGTAGACGGCTGGCCAGAGACTACTGCCCAGGAACGG
GCCAATTTATTATTTAAGCTTGCTGATGAAATCGAAGCAATTGCCCCGGAATTAGCCGCGCTAGAGACATTGTCCAATGG
TAAACCGTTGCGGGAGGCTGAATATGACGTGGCAGATGCTGCCGGCTGCTTCCGCTATTACGCCGGATTAGTTACAAAAC
CCCACGGGCAGGTATTCGATGTTCCCGCACCATCCCAATCCTTTGTGGTAAGAGAGCCTGTTGGTGTCTGCGGTCAAATT
GTTCCCTGGAACTTTCCGCTTTTGATGTGCGCCTGGAAACTAGGGCCGGCGCTTGCCGCAGGCAACGTAAGCGTTTTAAA
ACCTGCAACATGGACACCTCTAACAGCATTACGGTTAGGAACCCTCATTGACAAGGTTGGATTTCCGAAAGGTGTGGTGA
ACATTCTGGTAGGTCCAGGCTCTAGTGTCGGCCAGTACCTAGCAGAAAGCCCTTTGGTTGATATGATTGCCTTAACTGGC
GGTACGGACACAGGGCGTAAAATAATGCAAGCTGCTTCTGGAAACATTAAGAAAATTGCCCTGGAACTGGGAGGAAAATC
ACCTAACATTATTTTTGCAGATGCCGATTTCGAGGTAGCCGTCGACTATGCACTTTATGGTATCTTTGTAAATTCAGGGC
AAGTTTGTTCTGCCGGATCACGCCTCTTGGTAGAAGAATCCATCCATGACCGGTTTGTAACAAGGTTGGTAGAAAGAGCA
TTGCAAATTCGTGTAGGTGATGGTTTCAATCCTGAGACAGAGATGGGTCCGTTGGTTTCAGCCCAACATTTAAAGACCGT
TGAGGATTATATTGCCATCGGTTTGTCTGAGGGAGCCCGGTTGCTGTGCGGCGGGAAACGTCCTGAAGGTGATTTGGGTA
AGCATGGCAATTACTTATTACCGACAATTTTTACTGATACCCGGTCAGATATGCGGATTGTCCGGGAAGAGATATTTGGA
CCGGTTCTCGTTGTTCAAACCTTTAAAGACGAAGCAGATGCAATTCGGGTAGCTAATGATTGTGTTTACGGGCTTGCTGG
TGCTGTATTTACAAACGATATTAGCAAAGCTCATCGGGTAATCAAAAAGATGAGGGCCGGAATCACGTGGATAAATACCT
ATCATCCAACATATAATGAAGCACCCTGGGGGGGGTATAAGCAGTCGGGGATCGGCCGTGAACTGGGTACTTTTGGTTTT
GAAGAATATACCGAGGTGAAACAAATTAACGTCAATTTGGCTGTTGAGCCAACGGGGTGGTTTAGCCACTAA

Protein sequence :
MMHNILKNLKQSTDGTFLMFIDGEWVSSSGGKTQELYNPATGEAIGSVAFGSEEDAERAIRAARRAFDVDGWPETTAQER
ANLLFKLADEIEAIAPELAALETLSNGKPLREAEYDVADAAGCFRYYAGLVTKPHGQVFDVPAPSQSFVVREPVGVCGQI
VPWNFPLLMCAWKLGPALAAGNVSVLKPATWTPLTALRLGTLIDKVGFPKGVVNILVGPGSSVGQYLAESPLVDMIALTG
GTDTGRKIMQAASGNIKKIALELGGKSPNIIFADADFEVAVDYALYGIFVNSGQVCSAGSRLLVEESIHDRFVTRLVERA
LQIRVGDGFNPETEMGPLVSAQHLKTVEDYIAIGLSEGARLLCGGKRPEGDLGKHGNYLLPTIFTDTRSDMRIVREEIFG
PVLVVQTFKDEADAIRVANDCVYGLAGAVFTNDISKAHRVIKKMRAGITWINTYHPTYNEAPWGGYKQSGIGRELGTFGF
EEYTEVKQINVNLAVEPTGWFSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-67 46
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-72 42
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 7e-74 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-73 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_2682 YP_006466946.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 2e-72 42