Gene Information

Name : Desaci_2555 (Desaci_2555)
Accession : YP_006466827.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2660307 - 2660996 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGAGTTTTTAAAAATTGAAGATTTATACAAGGTCTACGGTAAGGGCGAAAGCCAAGTCACCGCGCTTGACCATGTTTC
GCTTGCCATCGAAAGGGGAGAGTTTACCGCAATCATCGGTTCCTCAGGTTCCGGCAAATCCACTCTACTGCACGCTATCG
CTGGTGTGGATAAGCCAACGGGGGGGAAGGTGTATCTTGAGGGGCAGGATGTCTATGCCCAAAGCAACGAAAAGCTTGCC
ATTTTCCGTAGACGGCAGGTCGGACTTATTTATCAGTTTCACAATCTCATTCCTACACTGAATGTGGTGGAAAACATCAC
CCTGCCGATTCTGATGGACAGTCGGAAGGTCAACGAGGAGAGGTTGAATGACCTGTTGGAGTTGCTTGGCCTGCATGAGC
GGAGAACACATTTGCCGAACCAGCTTTCCGGCGGTCAGCAGCAGCGCGTGGCCATCGGCCGCGCATTGATGAATGCCCCA
GCTGTGATGCTTGCCGACGAACCCACCGGCAGTTTGGACAGCCGCAACAGTCATGAGATCATCCATCTGCTTAAAGAAAG
CCATACAAAGTACCATCAGACCCTGATCATCGTCACGCACGATGAAAACATCGCTTTGCAGGCAGACCGTATCATCGGAA
TCTCGGATGGTAAAGTGGTGCGGGACGAGAGGCAGGCGGCTCGCTCATGA

Protein sequence : 
MEFLKIEDLYKVYGKGESQVTALDHVSLAIERGEFTAIIGSSGSGKSTLLHAIAGVDKPTGGKVYLEGQDVYAQSNEKLA
IFRRRQVGLIYQFHNLIPTLNVVENITLPILMDSRKVNEERLNDLLELLGLHERRTHLPNQLSGGQQQRVAIGRALMNAP
AVMLADEPTGSLDSRNSHEIIHLLKESHTKYHQTLIIVTHDENIALQADRIIGISDGKVVRDERQAARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_2555 YP_006466827.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-49 54
Desaci_2555 YP_006466827.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-46 50
Desaci_2555 YP_006466827.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 6e-29 41