Gene Information

Name : Desaci_1956 (Desaci_1956)
Accession : YP_006466265.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2021034 - 2021735 bp
Length : 702 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
TTGAAGGAGGAGATTAACATAGATAAGAAGGGACAACGAATCTTAATCATTGATGATGAAACCCAAATTCGCAGATTTTT
ACGGGTTAGTTTGACCAGTCATGGTTACGACGTTCGGGAAGCAGGAACAGGTCAAGCCGGTTTAGAGGAAGTTGCCATGA
ATAATGCAGATCTTGTGATTTTGGACTTAGGACTCCCTGATATGAATGGTATGGAGGTTTTGAATAAAATCAGAGAATGG
TCCAAAGTTCCTATCATTATTCTGTCCGTCAAAGAACAAGAAACAGATAAAATCACGGCCCTTGACCACGGAGCGGATGA
TTATGTAACTAAGCCCTTTAGTATGGGCGAATTACTGGCGCGAATGCGCGCAGCGTTACGTCATTCGGAGAGAGTCGAAG
AAGAACCGATCTTGAAATTTGATGATTTAGTCCTTGATTTGTCTCACCGGCAGGTCAAAGTGTCTGACGGAGAAATAAAG
CTGACTCCCACGGAATATGAGTTGATGAAAAATCTTGGATTGAATGCCGGAAAAGTTCTCACCCATAAGTTTCTTCTGCG
GACAGTCTGGGGGCCTGCCTACGAAAATGACATACAGTATTTAAGGGTCTTTATGGGGCAGATTCGCCGCAAAATTGAAA
GGGACCCCTCACGTCCACGCCATATTATTACTGAACCAGGGGTTGGCTACAGATTATTATAA

Protein sequence :
MKEEINIDKKGQRILIIDDETQIRRFLRVSLTSHGYDVREAGTGQAGLEEVAMNNADLVILDLGLPDMNGMEVLNKIREW
SKVPIIILSVKEQETDKITALDHGADDYVTKPFSMGELLARMRAALRHSERVEEEPILKFDDLVLDLSHRQVKVSDGEIK
LTPTEYELMKNLGLNAGKVLTHKFLLRTVWGPAYENDIQYLRVFMGQIRRKIERDPSRPRHIITEPGVGYRLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-40 45
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 4e-40 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_1956 YP_006466265.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 4e-34 41