Gene Information

Name : Desaci_1089 (Desaci_1089)
Accession : YP_006465460.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1154838 - 1155524 bp
Length : 687 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAAGCGGATTTTAATTATTGAAGATGATTTGAATATTGCTGAATTAGAGCGGGACTATCTCTGCTTAAACGGGTATGA
TACAGAAATTGTCCAAGATGGGATTCAAGGCTTAAAAAAAGCCTTAACCGGTCGTTACGACGTAATTATCGTTGACCTAA
TGCTGCCTGGCAAAGATGGATACCAAATCACGAAAGAAATACGTGAAAAATTTGAAATTCCAGTCATTATCGTTTCTGCC
AAAAATGAAGACATCGATAAGATTAGGGGGTTGGGGTTTGGAGCCGATGATTACTTGACAAAACCTTTTAGTCCCGCCGA
GCTGACTGCAAGGGTTAAATCACATATCACCAGGTATGAACGACTCAAAGGCAGAGCCGTTGCTCTTGAAGTGATCAACC
ATCGGGGATTGGAAATTAATACAGCATCTCGTAAAGTTTTTGTCAATGGCAAGGAGGTTCTATTGACAACCACTGAATAT
GAGCTTCTAGTTTTCTTTGCCACAAATCCTAATATTGTTTTCAGCAAAGAACATCTTCTTGCTACGATCTGGGGAGATGA
GTACTTCGGAGATACCGCAACAGTTTCTGTCCATGTTCAGAAGATCAGAAAAAAGATTGAAAGAGATCCATCGAATCCGG
AATATATAGAAACATTGTGGGGTGCGGGTTATCGGTTTAATGCCTAG

Protein sequence :
MKRILIIEDDLNIAELERDYLCLNGYDTEIVQDGIQGLKKALTGRYDVIIVDLMLPGKDGYQITKEIREKFEIPVIIVSA
KNEDIDKIRGLGFGADDYLTKPFSPAELTARVKSHITRYERLKGRAVALEVINHRGLEINTASRKVFVNGKEVLLTTTEY
ELLVFFATNPNIVFSKEHLLATIWGDEYFGDTATVSVHVQKIRKKIERDPSNPEYIETLWGAGYRFNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-30 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 5e-25 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 1e-22 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 1e-34 41
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 3e-31 42
Desaci_1089 YP_006465460.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 1e-30 42