Gene Information

Name : Desaci_4741 (Desaci_4741)
Accession : YP_006464394.1
Strain :
Genome accession: NC_018066
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8889 - 9293 bp
Length : 405 bp
Strand : +
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGCTTAATAAAACGATTCTTATTGGGAGATTGACGAAGGACCCCGAATTGCGCTATACACCGACCGGAGTGGCCGTTAC
AAATTTTACGTTAGCGATTGATCGTAATTTTAAGAATGCACAGGGAGAACGGGACACAGACTTTATTCCTTGCGTTGTCT
ACAGACAACTCGCCGAGTTTGTCGCGAATTATTTAGCAAAGGGAAAAATGGCTGCCGTTGATGGGCGAATACAGGTACGT
TCTTATAGCGCACAGGATGGTTCAAAACGTTGGGTTACAGAGGTTATAGGTGAAAATGTTCACCTGTTGAGTCCGAAGGA
TAGTGGCGGTCAAGTAGAGGACGTTCCTGGGGGGAACCAATCGTTTGGACATGAGGTTAATCTTGATGATGATATTCCGT
TTTAG

Protein sequence :
MLNKTILIGRLTKDPELRYTPTGVAVTNFTLAIDRNFKNAQGERDTDFIPCVVYRQLAEFVANYLAKGKMAAVDGRIQVR
SYSAQDGSKRWVTEVIGENVHLLSPKDSGGQVEDVPGGNQSFGHEVNLDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-30 61
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 5e-30 60
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-30 60
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 9e-30 59
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-30 55
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-30 55
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-30 55
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-30 55
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 6e-30 54
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-30 53
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-29 49
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 6e-29 48
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 9e-29 48
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-25 46
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-16 43
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 5e-16 43