Gene Information

Name : ytrE (SSIL_3560)
Accession : YP_006464129.1
Strain : Solibacillus silvestris StLB046
Genome accession: NC_018065
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3695218 - 3695916 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAAGTAAAGAACTTACAACATACATTTTCTATCGGTAAACGCGGAAAGGAAAGACAGGTTCCGGTACTTAAAGA
TGTATCATTTGATGTGGAAAAGGGGGAAATCGTAGCGGTCGTCGGGAAAAGCGGATCAGGTAAATCTACACTGCTTCAGA
TTTTGGCGGGTTTTATGAAACCGGAACACGGTTCAATTGTAGTAAATGCACAGGAAATTGCAGGATTTAATGAGATTCAG
AGTGCAAAATTTCGTTTGGAAAACTTCGGCTTCATCTTTCAAAACTTTCAGCTGATGCCGAGTTTGACGGCATTTGAGAA
CATTGAATTGCCACTAAAGCTGCAAGGGATGAACGTTTCAGAACGCAGAAAACGAGTTGAAGTAATTATGAAAAAGGTTG
GTTTAACTGAAGTGACCGACCATTACCCGAACGAGCTATCGGGCGGGCAGCAACAGCGGGTAAGTATTGCCCGTGCTCTT
GTGACGAACGCGCCGATTTTGTTGGCGGATGAACCGACAGGAAGCCTTGATTCAGAGACAGAGCAAGATATTTTAATGCT
CATCCAGCAGCTGAACCGCGAATTGGATTTGACATTTATTATTATTACACATGATGAGGAAGTGGCAATGATTGCGGACA
AGCGCTTTCGTATGCATGACGGTCAATTGGTGAAAGAAGGTGAACACAATGTTATTTAA

Protein sequence : 
MIKVKNLQHTFSIGKRGKERQVPVLKDVSFDVEKGEIVAVVGKSGSGKSTLLQILAGFMKPEHGSIVVNAQEIAGFNEIQ
SAKFRLENFGFIFQNFQLMPSLTAFENIELPLKLQGMNVSERRKRVEVIMKKVGLTEVTDHYPNELSGGQQQRVSIARAL
VTNAPILLADEPTGSLDSETEQDILMLIQQLNRELDLTFIIITHDEEVAMIADKRFRMHDGQLVKEGEHNVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-39 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_006464129.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-38 46
ytrE YP_006464129.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-41 44
ytrE YP_006464129.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 4e-39 44