Gene Information

Name : fepC (SSIL_3204)
Accession : YP_006463773.1
Strain : Solibacillus silvestris StLB046
Genome accession: NC_018065
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+siderophores transport systems, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3274256 - 3275026 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
ATGGAAATTAAACAAGTAGTCGTTTCCCATGATGGGGCGACCCGCCATTTAAATGCAGTTTCGACCGCCATTCCAAAAGG
GAAAGTGACGACAATCATAGGGCCGAATGGCTGCGGGAAATCTACATTGCTAAGTGTTATGTCACGGAACAAAAAACCGC
TTGAAGGTCAGGCAACGCTCGAAAATCGGGATTTAGTGGAATATAAGTCGAAAGAGTTTGCAAAGAAATTGGCGATTGTC
TATCAGCAAAACGATATTCCTTCAGATTTGACGGTGGAGAAGCTTGTTATGTACGGTCGGATGCCGCATACTTCATTATT
CAAGAAGCGAGCTGAAGAGGATGAGGAGGCCGTTACATGGGCGCTTACATGTACGAATCTGCTTGAAAAACGGCATAATG
ATTTGTCGGCACTTTCCGGCGGAGAACGGCAGCGTGTATGGATTGCAATGGCACTTGCACAAAAATCGGAAATATTGTGC
CTGGACGAGCCGACAACGTATTTGGATATATACTATCAGCTGGAACTGCTGGAGCTCGTTAAGCAACTAAATGAACAGTA
TGGCTTGACGATAGTCATGGTACTCCACGACATTAATCAGGCAATCCGCTATAGTGACCACATTATTTTGATGAAAGCCG
GTAAAATCATTGCTGAAGGTGCACCGCGCGATGTTATTACAAAAGAAGTAATTAAGGAAGTATACGGGGTCAATTCCGTG
TTTCATGAAGATGAGCAGCTCGGGTTATATATGATGCCGTTAAGTATTTAA

Protein sequence :
MEIKQVVVSHDGATRHLNAVSTAIPKGKVTTIIGPNGCGKSTLLSVMSRNKKPLEGQATLENRDLVEYKSKEFAKKLAIV
YQQNDIPSDLTVEKLVMYGRMPHTSLFKKRAEEDEEAVTWALTCTNLLEKRHNDLSALSGGERQRVWIAMALAQKSEILC
LDEPTTYLDIYYQLELLELVKQLNEQYGLTIVMVLHDINQAIRYSDHIILMKAGKIIAEGAPRDVITKEVIKEVYGVNSV
FHEDEQLGLYMMPLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-45 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-45 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-47 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-47 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-40 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_006463773.1 ABC-type cobalamin/Fe3+siderophores transport systems, ATPase component BAC0164 Protein 5e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_006463773.1 ABC-type cobalamin/Fe3+siderophores transport systems, ATPase component VFG0925 Protein 3e-48 47
fepC YP_006463773.1 ABC-type cobalamin/Fe3+siderophores transport systems, ATPase component VFG1042 Protein 5e-40 42