Gene Information

Name : SSIL_3026 (SSIL_3026)
Accession : YP_006463595.1
Strain : Solibacillus silvestris StLB046
Genome accession: NC_018065
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transport system, large permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3085583 - 3086863 bp
Length : 1281 bp
Strand : -
Note : -

DNA sequence :
ATGGGGATTGGGATTTTACTTGCAGTATTTGTAGTGTTATTACTTTTACGAGTGCCGGTTGCACTTTGTCTGGCTGTATC
GTCATTTGTCACTACGATTTACTTAGGGATTGATTTAGCTGCTATTGTACAGCGAATGGTAAGTGGATTGAATAGTTTTT
CGCTTATTGCGATTCCATTTTTCATTTTAGCTGGTGAAATTATGAATGAAGGCGGTATCTCGCGTCGTTTAATTAATCTA
GCGAACGTTATTGTCGGTAAAGTACGCGGCGGTTTAGCAATGGTAAACGTTTTATCTTCAACGTTTTTTGGGGGTATTTC
CGGTTCGGCTGTAGCGGACGTTTCATCAATTGGTTCTGTATTAATTCCGATGATGAAAAAGCAAAAATATGATGCGGAAT
ATTCTGTTGCCGTTACAATTTCAAGTGCTGCACAAGGGGTTTTAATTCCGCCAAGTCATAATATGATCATTTATTCTACT
GCTGCCGGTGGTGTATCGGTTGGTGCATTGTTTATGGGGGGGATAGTTCCTGGTATTGCATTAGGGTTAATTTTAATGAT
CTTTGCGTATACGATTGCAGTAAAACGTAATTATCCGAAAGGTGAACCGATTAAGCGTGAAGAAGTTCCGAAAATTGTAC
GTGAAGGATTATTAGGATTGTTTACAGCGGTCATTATTATTGGCGGGATATTATCCGGTGTTTTCACAGCGACTGAATCC
GCGGCAATCGGTGCGTTATATGCGTTTATTATTTCGTTCTTCGTTTATAAAGACGTGCCGCTATCGGCAATGGGGAACAT
TTTAAAACGTACAGTAAAAACATTATCGATGGTACTGTTTTTAATTGCTGCTTCTTCGGCATTCGGCTGGTTACTTGCAT
TTCTAAAAGTACCAGCAATGGTAACCGAAACGTTATTGGCTGTTTCGCCGAATGATTTTGTAACATTATTAATTATTAAT
ATCATTTTACTAGTATTAGGGATGTTCATGGACATGGCACCGTTAATTTTAATTGCGACACCAATTTTATTACCTGTAGC
GCTTGAAGCAGGTATGGATCCGGTTCAATTTGGGGTTGTATTGATTCTGAACTTAGCAATCGGTCTTGTAACGCCGCCAG
TTGGTACATGTCTGTTTGTCGGATGTGCGATCGGAAAAATACCGATTGAAAAAGCGACAAAAGGGATGCTTCCATTCTAT
GGTGCAATGATTGTTATACTACTATTAATAACGTTTGTTCCAGACATTACGTTAAAACTTCCGGAATTACTATTAAAGTA
A

Protein sequence :
MGIGILLAVFVVLLLLRVPVALCLAVSSFVTTIYLGIDLAAIVQRMVSGLNSFSLIAIPFFILAGEIMNEGGISRRLINL
ANVIVGKVRGGLAMVNVLSSTFFGGISGSAVADVSSIGSVLIPMMKKQKYDAEYSVAVTISSAAQGVLIPPSHNMIIYST
AAGGVSVGALFMGGIVPGIALGLILMIFAYTIAVKRNYPKGEPIKREEVPKIVREGLLGLFTAVIIIGGILSGVFTATES
AAIGALYAFIISFFVYKDVPLSAMGNILKRTVKTLSMVLFLIAASSAFGWLLAFLKVPAMVTETLLAVSPNDFVTLLIIN
IILLVLGMFMDMAPLILIATPILLPVALEAGMDPVQFGVVLILNLAIGLVTPPVGTCLFVGCAIGKIPIEKATKGMLPFY
GAMIVILLLITFVPDITLKLPELLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 1e-61 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 1e-61 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 9e-62 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSIL_3026 YP_006463595.1 TRAP-type C4-dicarboxylate transport system, large permease component VFG1110 Protein 5e-62 42