Gene Information

Name : fliI (SSIL_2994)
Accession : YP_006463563.1
Strain : Solibacillus silvestris StLB046
Genome accession: NC_018065
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis/type III secretory pathway ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3054058 - 3055383 bp
Length : 1326 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATGGCTCAATTAGTTGAACAAATTCCTAATCTTAATACATTTAAAAAGTATGGGAGAGTGACGAGAGTTGTCGG
CTTGATGATTGAGTCCCAAGGTCCTGAAAGTTCCATCGGTGACGTATGTAAAATCCATATTCAAACATCGAAAAACGGTC
CGCAAGTTATGCTGGCGGAAGTAGTAGGTTTTAAAGATGAGATTGTGATTTTAATGCCATACTCTTCGCTGAAGGAAATT
TCGATTGGCTGTCTTGTAGAGGGGACAGGTTCACCGCTGGAAGTGAAAGTAGGTCCTGAACTGATTGGAAAAGTTCTAGA
TGCGATGGGTAACCCGTTTGATGGACAACCATTACCAAAAGGATTAATGACAGTACCAACGGAAAAAGAGCCGCCAAATC
CTTTAAGTCGTCCGCCGATTAACGAACAGTTAGAGGTCGGGGTAAAGGCGATTGACGGAATGCTTACAGTTGGCAGCGGT
CAGCGTGTAGGTATATTTGCAGGATCGGGCGTCGGAAAAAGTACATTGCTTGGTATGATTGCCCGAAACACGGAAGCAGA
TATCAATGTCATTGCGCTTGTAGGAGAACGTGGACGTGAAGTACGGGAGTTTATCGAACGGGATTTAGGTCCAGAAGGGT
TACAAAGGTCGGTTGTTGTAGCGGCTACCAGTGATCAGCCGGCATTAATGCGGATTAAAGCGGCATTTACCGCCACAGCC
ATTGCAGAATATTTTAGGGATCGCGGAAAGAACGTCATGTTAATGATGGATTCCGTAACACGTGTTGCGATGGCACAGCG
CGAAATTGGACTGGCAATCGGTGAACCGCCTGCTACAAGAGGTTATACACCATCTGTTTTTGCAATATTACCAACATTAT
TGGAACGGTCAGGTACGAATATAAATGGGACAATTACCGCATTTTATACAGTGCTAGTTGACGGTGATGATATGAATGAA
CCAATTGCAGATGCGGTCCGGGGGATTTTGGACGGTCATATTGTACTGGACCGGAATCTTGCCAATAAAGGCCAATATCC
TGCGATTAACATATTAAAAAGTGTAAGTCGTTTAATGAATCATATTGCACAGCCTGAACATGTGCGTGCAGCAAGCCGAT
TGCGGGAATTATACTACAGCTATTCAAAATCGGAGGACCTGATCAATATCGGGGCCTATAAGCGCGGCACATCAAAGGAA
ATCGACGAAGCAATTATGTATGAGCCGCTCATTACGGAATTTTTAAAGCAAGGGTATAAAGATAAAATTTCGATCGATCA
AACAGTCAATGAAATTATCGCATTATCGAATGGTGGTGCCCGTTAA

Protein sequence :
MKMAQLVEQIPNLNTFKKYGRVTRVVGLMIESQGPESSIGDVCKIHIQTSKNGPQVMLAEVVGFKDEIVILMPYSSLKEI
SIGCLVEGTGSPLEVKVGPELIGKVLDAMGNPFDGQPLPKGLMTVPTEKEPPNPLSRPPINEQLEVGVKAIDGMLTVGSG
QRVGIFAGSGVGKSTLLGMIARNTEADINVIALVGERGREVREFIERDLGPEGLQRSVVVAATSDQPALMRIKAAFTATA
IAEYFRDRGKNVMLMMDSVTRVAMAQREIGLAIGEPPATRGYTPSVFAILPTLLERSGTNINGTITAFYTVLVDGDDMNE
PIADAVRGILDGHIVLDRNLANKGQYPAINILKSVSRLMNHIAQPEHVRAASRLRELYYSYSKSEDLINIGAYKRGTSKE
IDEAIMYEPLITEFLKQGYKDKISIDQTVNEIIALSNGGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-99 52
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-99 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-99 51
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 7e-103 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 7e-103 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-103 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-102 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-103 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-103 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-102 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-90 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-87 47
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-85 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-86 47
escN AAC38383.1 EscN Virulence LEE Protein 1e-86 47
escN AAC31513.1 L0034 Virulence LEE Protein 1e-86 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-85 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-86 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 5e-86 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-86 47
escN AAK26715.1 EscN Virulence LEE Protein 1e-85 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-86 47
escN AAL57542.1 EscN Virulence LEE Protein 1e-85 47
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-84 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-82 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-82 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-83 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 6e-83 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-83 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 8e-77 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-81 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-81 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-80 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 6e-80 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-80 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 5e-87 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 5e-82 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-78 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 7e-79 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-79 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-76 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 7e-74 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-76 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-76 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 1e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG2144 Protein 1e-105 52
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG0048 Protein 5e-95 51
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG0390 Protein 8e-98 51
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG0192 Protein 2e-101 51
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG1254 Protein 1e-97 51
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG2499 Protein 2e-91 49
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG2331 Protein 3e-93 48
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG0730 Protein 7e-87 47
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG0812 Protein 6e-87 47
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG0515 Protein 3e-83 46
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG1008 Protein 3e-70 42
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG2459 Protein 2e-74 42
fliI YP_006463563.1 flagellar biosynthesis/type III secretory pathway ATPase VFG1778 Protein 2e-71 41