Gene Information

Name : ribD (SSIL_2213)
Accession : YP_006462782.1
Strain : Solibacillus silvestris StLB046
Genome accession: NC_018065
Putative virulence/resistance : Unknown
Product : pyrimidine deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2284376 - 2285491 bp
Length : 1116 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACTGATCAGGACTATATGCAGCTTGCGCTTGAATTGGCAGCAAGTGCCAGAGGGAATACAAATCCAAATCCGCT
AGTTGGAGCCGTTATCGTAAAAGATGGTGTCATTGTCGGTACAGGACTTCATCGAAAAGCAGGGGAACCCCATGCAGAAG
TACATGCGGTGAATATGGCAGGTGAACATACAAAAGATGCGACAATTTATGTCACACTGGAACCATGTTCACACTACGGC
AAAACACCACCTTGTGCGAAGCTGTTGAAAGAAAGCGGATTTAAACGCGTCGTCGTTGCCACGGAAGATCCAAATCCTGA
AGTAGCTGGGCGCGGTATTCGTCTTTTACGCGATGCGGGAATCGAAGTGGAAGTCGGTGTGCTTCAAGAGGAAGCACAAA
AGCTGAATGAACGCTTTATTCATAATATGCTGACAGAGCGTCCGTTTGTAGTTGCGAAATTCGCCATGACACTTGACGGC
AAAATTGCGACATATAATGGTCATTCACAATGGATTACAGGGGAAGAAGCGCGCGCGGATGTACATGAATTGCGTCATGA
AGTGGACGGGATATTAGTAGGTGTACAAACGGTTTTAAATGATAATCCAAAGCTGACGACGCGACTAAATGATGATCGAC
AAGGTCGTAACCCGATACGTGTCGTGTTGGACAGTACTTTGAAAACACCGGTTGATGCACATATTGCGGACACAACGGAT
GCTCGTACAATCATTGTCACTTCACTCGATTCTGATGAAGAAAAGGCACAGCAATTGGAGCGCAATGGTGTTGAAATTAT
TCGAGTAGATAAAGAAAAAACAGGCTTGCACATAGAGGATATGTTGAAAGCATTATATAAAAAGGGTATTACGCATCTAC
TTGTTGAAGGTGGAGGCAATGTGAACGCGTCATTTTTACGAGGCGGCTTCATTGACCAGTATATCGTGTATATCGCACCG
AAAGTATTGGGCGGGAAAAATTCCATTACACCGTTTACAGGAACTGATGTAGAAACAATCGATTTGGCAAATCAGCTTGA
ATTCGGTGAAGTCACTCACGTCGGGGAAGATTTGCGTATTATTGCCTATCCAAAGAAGGCTGGTTTACATGATTAA

Protein sequence :
MKTDQDYMQLALELAASARGNTNPNPLVGAVIVKDGVIVGTGLHRKAGEPHAEVHAVNMAGEHTKDATIYVTLEPCSHYG
KTPPCAKLLKESGFKRVVVATEDPNPEVAGRGIRLLRDAGIEVEVGVLQEEAQKLNERFIHNMLTERPFVVAKFAMTLDG
KIATYNGHSQWITGEEARADVHELRHEVDGILVGVQTVLNDNPKLTTRLNDDRQGRNPIRVVLDSTLKTPVDAHIADTTD
ARTIIVTSLDSDEEKAQQLERNGVEIIRVDKEKTGLHIEDMLKALYKKGITHLLVEGGGNVNASFLRGGFIDQYIVYIAP
KVLGGKNSITPFTGTDVETIDLANQLEFGEVTHVGEDLRIIAYPKKAGLHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-52 42
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-52 42