Gene Information

Name : ydfA (SSIL_2151)
Accession : YP_006462720.1
Strain : Solibacillus silvestris StLB046
Genome accession: NC_018065
Putative virulence/resistance : Resistance
Product : Na+ antiporter NhaD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2221747 - 2223042 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence :
TTGAATATGTTTGTCATTGCGTTACTCATTTTTATTGTAACGCTGGTTTTTGTAATCTGGCAGCCAAAGGGACTGAATAT
TGGCTGGTCGGCAATGGTTGGCGCAATCGTCGCATTACTTGTTGGTGTTGTAGATTTTAACGATGTCGGCACAGTCATTG
ACATTACGTGGAATGCCACATTATCGTTTATTGCGATTATATTAATTTCACTAATATTAGATGAAATCGGCTTGTTCGAA
TGGGCTGCACTACATATGGCACGGGCCGCAAAAGGCAATGGTATTAAAATGTTTGTGTATGTTAGTCTGCTAGGAGCTGT
CGTTGCTGCATTATTTGCGAATGATGGAGCTGCTTTGATTTTAACACCCATTGTGTTAGCAATGGTGCGTAATTTACAGT
TTAGCGAAAGAATGATTTTCCCATTTATTATGGCAAGTGGCTTTATTGCGGACACGACAAGTTTACCGTTTGTCGTAAGT
AACTTAGTCAACATTGTTTCTGCTGATTTCTTCGATATTGGGTTTGTAGAGTATGCTTCGCGTATGATTATTCCCAACTT
GTTCTCGTTAGCGGCAACGATTGTCGTGCTGCTGATTTACTTTAACAAGTCGATTCCACGCGAATACAATGAATCGATGT
TAAAGGAACCAAACCTTGCAATTAAAGATATGAAAATGTTTAAACTTTCATGGGTTGTGCTTGCAATTTTAGTTGTTGGC
TATTTCTCAAGTGAATTTATTGGCGTACCAGTTTCTCTTGTTGCAGGCATTATTGCAGTTTTCTTCTTAGTCATGGCGCG
GCAAAGTGCTGTCGTTGATACAAAAGCGGTTGTGAAAGGTGCACCTTGGAATATCGTATTCTTTTCAATCGGTATGTATG
TCGTTGTTTACGGACTTGGCAATGCAGGTTTAACTCCTATGTTAGCTAGTGTAATTGAATGGACAGCAGAGCAAGGATTG
TTCGCAGCTACTGTTGGAATGGGCTTTATCGCGGCTTTTCTATCATCTGTCATGAACAATATGCCAACAGTGATGGTCAA
TGCTTTAGCGATTGCTGAAACGACGACGAATGGCACATTACGTGAAGCATTAATTTACGCAAACGTGATCGGGTCAGACT
TAGGTCCAAAAATTACACCAATCGGATCACTGGCAACACTGGTTTGGTTATATGTACTATCTCAAAAAGGTGTAAAAATT
TCTTGGGGTACGTACTTTAAAACCGGGATTGTGTTAACGGTGCCTATTCTTATCTTTACTTTAATTGGACTATATATTAC
ATTACTAATCTTTTAA

Protein sequence :
MNMFVIALLIFIVTLVFVIWQPKGLNIGWSAMVGAIVALLVGVVDFNDVGTVIDITWNATLSFIAIILISLILDEIGLFE
WAALHMARAAKGNGIKMFVYVSLLGAVVAALFANDGAALILTPIVLAMVRNLQFSERMIFPFIMASGFIADTTSLPFVVS
NLVNIVSADFFDIGFVEYASRMIIPNLFSLAATIVVLLIYFNKSIPREYNESMLKEPNLAIKDMKMFKLSWVVLAILVVG
YFSSEFIGVPVSLVAGIIAVFFLVMARQSAVVDTKAVVKGAPWNIVFFSIGMYVVVYGLGNAGLTPMLASVIEWTAEQGL
FAATVGMGFIAAFLSSVMNNMPTVMVNALAIAETTTNGTLREALIYANVIGSDLGPKITPIGSLATLVWLYVLSQKGVKI
SWGTYFKTGIVLTVPILIFTLIGLYITLLIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 9e-122 68
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 6e-125 68
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-127 67
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 6e-100 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ydfA YP_006462720.1 Na+ antiporter NhaD BAC0574 Protein 8e-124 68
ydfA YP_006462720.1 Na+ antiporter NhaD BAC0575 Protein 4e-128 68
ydfA YP_006462720.1 Na+ antiporter NhaD BAC0576 Protein 3e-100 59
ydfA YP_006462720.1 Na+ antiporter NhaD BAC0578 Protein 9e-102 59
ydfA YP_006462720.1 Na+ antiporter NhaD BAC0031 Protein 3e-95 58
ydfA YP_006462720.1 Na+ antiporter NhaD BAC0577 Protein 2e-99 58