Gene Information

Name : A458_00040 (A458_00040)
Accession : YP_006455699.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8800 - 9606 bp
Length : 807 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
GTGCATCCCAGCGGTTACTACGCCTGGCTGGCTGAGCCCAAGTCCGCACGGGCCAAGGACGATCAGCGCGTGCTGGGTTT
GATCAAGCATTCCTGGCTGGAGAGCGGCGGGGTTTATGGTTATCGCAAGATCCATGCAGATCTGCGCGAACTAGGTGAGT
GCTGTGGGCGGCATTGTGTGGCTAGGCTGATGCGTGCGGAAGGACTGCGTTCGCAAACAGGCTATCGTCGCCGCCCCGGT
CGCTATGGCGGCAAGCCGCCAACACCTGCGCCGAATCGGCTGGAACGCCAGTTCAATGTCAGCGAGCCGAATAAAGTTTG
GGTCACCGATATCACCTACATCCGTACCTACGAAGGTTGGCTGTATTTGGCAGTGGTGCTCGATCTGTTCTCTCGTCAGG
TCATCGGTTGGTCGATGAAATCACGCATGAGTAGTGATCTGGCTATTGATGCGCTTCTGATGGCCGTCTGGCGACGCAAG
CCGAAGCAGGAAGTAATGATCCACTCTGACCAGGGCAGTCAGTTCAGTAGCTCGGATTGGCAGAGTTTTCTCAGGGCCAA
CAATCTTGTTGGCAGCATGAGTCGTCGTGGCAACTGCCATGACAACGCGGTTGCTGAGAGTTTCTTTCAGTTGCTCAAGC
GTGAGCGGATCAAGCGCAGGATTTACGGCAGTCGAGATGAGGCGAGAAGCGATGTGTTCGATTACATCGAGATGTTTTAC
AACCCCAAACGACGACATGGTTTCGCCGAGAAGCTGTCGCCGGTAGAGTTCGAACGACGTTATTTTCTGAGGCAGGACAG
TCTCTAG

Protein sequence :
MHPSGYYAWLAEPKSARAKDDQRVLGLIKHSWLESGGVYGYRKIHADLRELGECCGRHCVARLMRAEGLRSQTGYRRRPG
RYGGKPPTPAPNRLERQFNVSEPNKVWVTDITYIRTYEGWLYLAVVLDLFSRQVIGWSMKSRMSSDLAIDALLMAVWRRK
PKQEVMIHSDQGSQFSSSDWQSFLRANNLVGSMSRRGNCHDNAVAESFFQLLKRERIKRRIYGSRDEARSDVFDYIEMFY
NPKRRHGFAEKLSPVEFERRYFLRQDSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 5e-37 46
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 5e-37 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-38 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 8e-39 43
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-38 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-39 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 8e-33 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-36 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-36 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 5e-36 41
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 1e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_00040 YP_006455699.1 IS3 family transposase VFG1631 Protein 7e-40 42