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Name : A458_03965 (A458_03965) Accession : YP_006456468.1 Strain : Pseudomonas stutzeri CCUG 29243 Genome accession: NC_018028 Putative virulence/resistance : Unknown Product : type I restriction-modification enzyme, R subunit Function : - COG functional category : - COG ID : - EC number : - Position : 881059 - 884160 bp Length : 3102 bp Strand : + Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : ATGACCGAAGACCAACTGGAACAGGAATGCCTTGGCTGGCTGGGCGAACTGGGTTACACGCACCTTTACGGGCCGGATAT CGCCCATGACGGCGGCGACCCGCAGCGCGACAGTTATCGCCAGGTCGTGCTGACGGAACGCCTGCGCGCCGCCATCGCCA AGCTCAATCCCCAGGTGCCGCTGGCCGCTCGCGAGGATGCGCTCAAGCAGGTAGTGGATCTGGGTGTGCCGGCGCAGTTG TCGGCCAACCGCCTGTTCCATCGGCTGCTGGTCGGCGGCGTGCCGGTGCAGTACCAGCTCGATGGCGAAACCCGGGGTGA TTTCGTGCGGCTGATCGACTGGGTAAACGTGCGCGGCAACGAGTGGCTGGCGATCAACCAGTTCAGCATTCAGGGGCCGA AGCACACCCGGCGCCCCGACATCATCCTGTTCGTCAACGGCCTGCCGCTGGTGCTGCTGGAGCTGAAGAACCCCGCCGAT GTGAACGCCGACCTGTGGAAGGCCTTCGACCAGTTGCAGACCTATAAGGAGCAGATTCCCGATCTGTTCCACTACAACGA AATCCTGGTGATTTCCGATGGCAGCGAGGCGCGCATGGGCTCGCTGTCGGCCGATGCCGAGCGCTTCATGAACTGGCGCA CCATCGATGGTGAGCAGCTCGACCCGCTGGGTCAGTTCAACGAACTGGAAACCCTTCTGCGCGGCGTGATGGCGCCGGAG ATGCTGCTGGATTACCTGCGTTACTTCGTGCTGTTCGAGGATGACGGTCGCTTGGTGAAAAAGATCGCCGGTTATCACCA GTTCCACGCGGTGCGGGCGGCGATCCGCCAGGTGGTGACCGCTTCGCGCCCGGGCGGCACGCACAAGGGCGGGGTGGTCT GGCATACCCAGGGCTCGGGTAAGAGCATCACCATGACCTGTTTTGCCGCACGGGTGATGCAGGCGGCGGCGATGGAGAAC CCGACCATCGTGGTGATCACCGACCGCAACGACCTGGACGGCCAGTTGTTCGGGGTGTTTTCGCTGTCGCATGACTTGCT TCGCGAGCAACCGGTGCAGGCCGAGACGCGTGGCGATCTGCGGGAGAAACTAGGCAACCGTCCGAGTGGCGGCATCGTGT TTGCCACCATTCAGAAGTTTATGCCGGGTGAGGATGAAGACAGCTTCCCGGTGCTTTCGACCCGCTCGAACATCGTGGTG ATCGCAGACGAGGCGCATCGCACCCAATATGGCTTCCATGCCTCGCTGAAGGCGCCCGACCTGAAGGTGGCCGAGGCCAG CGCCCGTTACCAGGTGGGCTATGCCCAGCACCTGCGCGACGCCCTGCCGAACGCCACCTTTGTGGCCTTTACCGGTACGC CGGTATCCAGTGAAGACCGTGACACCCGGGCGGTGTTCGGTGACTACATCCACGTCTACGACATGCAGCAGGCCAAGGAC GACGGCGCCACGGTGGCGATCTACTACGAATCGCGGCTGGCCAAGCTGTCGCTGAAAGACAGTGAGCTGGCACATATCGA TGATGAAGTGGACGAGCTGGCCGAAGATGAGGAAGAGGATCAGCAATCGCGCCTGAAATCGCGCTGGGCGGCGCTGGAAA AGGTCGTGGGTGCCGAGCCGCGTATCAAAAGCGTGGCGGCGGATCTGGTCGCGCACTTCGAGGAGCGCAATCAAGCGCAG AGCGGCAAGGCCATGATCGTGGCCATGAGCCGCGAGATCTGTGTGCATCTGTACAACGAGATCGTCGCGCTGCGCCCCGA ATGGCACGACGAAGACCCGGAGCAGGGCGCGATCAAGGTGGTGATGACCGGCAGCGCTTCGGACAAGGCGTTGCTGCGCC CGCATATCTATCCGAGCCAGGTGAAAAAACGCCTGGAGAAACGCTTCAAGGACCCGAAAGACCCGCTGCAGCTGGTCATC GTGCGCGACATGTGGCTGACCGGCTTCGACGCGCCCTGCGTGCATACCCTGTATGTCGACAAGCCCATGAAGGGCCACAA CCTGATGCAGGCCATCGCCCGGGTGAACCGCGTATTCAAGGACAAGCAGGGCGGCCTGGTGGTGGATTACATCGGCATTG CCAACGAACTGAAGGCTGCGCTCAAGGAGTACACCGCCAGCAAGGGGCGCGGCCGGCCAACCGTGGATGCCCACGAAGCC TACTCAGTACTGGAGGAAAAGCTCGATGTGTTGCGCAGCCTGCTGCATGGCTTCGACTACAGCGATTACCTGACCGGCGG CCACAAGCTGCTGGCCGGTGCGGCCAACCATGTGCTGGGCCTGGAGGATGGCAAGAAGCGCTTCGCCGACAACGCGCTGG CCATGAGCAAGGCCTTCACCCTGTGCTGCACGCTGGATGAAGCCAAGGCGGTGCGCGAGGAGGTGGCCTTTCTGCAGGCC ATCAAGGTGCTGCTGACCAAGCGCGAGATCAGTGCCAAGAAGAAGAGCGACGAGGAACGCGAACTGGCTATCCGCCAGAT CATCGGCAATGCCGTGGTCTCCGGCGAGGTGGTGGATGTGTTCGAAGCGGTGGGCCTGGACAAGCCCAACATCGGCCTCT TGGACGATGAGTTCCTCGCTGAGGTACGCAACCTGCCTGAGAGGAACCTGGCGGTGGAGCTGCTGGAGCGGCTGCTGGAA GGCGAGATCAAGAGCAAGTTTGCCAGCAACCTGGCACAGGAAAAGAAATTCTCCGAGCTGCTCGACAACGTGATCAAGCG CTACCAGAACCGCTCCATCGAAACCGCTCAGGTCATCGAAGAACTGATCGAGATGGCCAAGAAGTTCGCCGCCGCCAGCA AGCGTGGCGATGAACTAGGGCTTAATGACGACGAGCTGGCCTTCTACGATGCTCTGGCCAATAACGAGGCATCCGTTCGC GAGCTGGGCGACGAGATCCTCGCTAAGATCGCCCACGAGCTGACCGCCAGCCTGCGGCAGAACGTGACGGTGGACTGGAG CAACCGCGACAGCGTACGTGCGAAGCTGCGGCTAATGGTCAAACGCATCCTACGGAAATATAAATATCCGCCGGATCAGC AGGAAGGCGCTGCACAGCTGATTTTGGAGCAGGCTGAGATGCTATGTGCGGGTTGGGCGTAG Protein sequence : MTEDQLEQECLGWLGELGYTHLYGPDIAHDGGDPQRDSYRQVVLTERLRAAIAKLNPQVPLAAREDALKQVVDLGVPAQL SANRLFHRLLVGGVPVQYQLDGETRGDFVRLIDWVNVRGNEWLAINQFSIQGPKHTRRPDIILFVNGLPLVLLELKNPAD VNADLWKAFDQLQTYKEQIPDLFHYNEILVISDGSEARMGSLSADAERFMNWRTIDGEQLDPLGQFNELETLLRGVMAPE MLLDYLRYFVLFEDDGRLVKKIAGYHQFHAVRAAIRQVVTASRPGGTHKGGVVWHTQGSGKSITMTCFAARVMQAAAMEN PTIVVITDRNDLDGQLFGVFSLSHDLLREQPVQAETRGDLREKLGNRPSGGIVFATIQKFMPGEDEDSFPVLSTRSNIVV IADEAHRTQYGFHASLKAPDLKVAEASARYQVGYAQHLRDALPNATFVAFTGTPVSSEDRDTRAVFGDYIHVYDMQQAKD DGATVAIYYESRLAKLSLKDSELAHIDDEVDELAEDEEEDQQSRLKSRWAALEKVVGAEPRIKSVAADLVAHFEERNQAQ SGKAMIVAMSREICVHLYNEIVALRPEWHDEDPEQGAIKVVMTGSASDKALLRPHIYPSQVKKRLEKRFKDPKDPLQLVI VRDMWLTGFDAPCVHTLYVDKPMKGHNLMQAIARVNRVFKDKQGGLVVDYIGIANELKAALKEYTASKGRGRPTVDAHEA YSVLEEKLDVLRSLLHGFDYSDYLTGGHKLLAGAANHVLGLEDGKKRFADNALAMSKAFTLCCTLDEAKAVREEVAFLQA IKVLLTKREISAKKKSDEERELAIRQIIGNAVVSGEVVDVFEAVGLDKPNIGLLDDEFLAEVRNLPERNLAVELLERLLE GEIKSKFASNLAQEKKFSELLDNVIKRYQNRSIETAQVIEELIEMAKKFAAASKRGDELGLNDDELAFYDALANNEASVR ELGDEILAKIAHELTASLRQNVTVDWSNRDSVRAKLRLMVKRILRKYKYPPDQQEGAAQLILEQAEMLCAGWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 58 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
