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Name : A458_03335 (A458_03335) Accession : YP_006456344.1 Strain : Pseudomonas stutzeri CCUG 29243 Genome accession: NC_018028 Putative virulence/resistance : Resistance Product : RND efflux transporter Function : - COG functional category : - COG ID : - EC number : - Position : 744650 - 747694 bp Length : 3045 bp Strand : - Note : COG0841 Cation/multidrug efflux pump DNA sequence : ATGGATTTCGCCCGCTACGCCATCACCCGCCCGGTCAACATCTGGATTCTGATACTGATCTGCCTGCTCGGCGGCACCCT CGCCTTCTTCGAGATCGGCCGCCTGGAAGACCCGGAATTCACCATCAAGCAGGCCATCGTCAACGTGCAGTATCCCGGCG CCACGGCGCTGGAGGTCGAACAGCAGGTGACCGAACCGCTGGAAAGCGCGATCCAGCAGATGTCGCAGATCAAGGAGCTC CGCTCACGCTCGATGCCGGGCATCGCCGAGATTCGCGTGGAGATGCAGGACCGCTACGACGGCGATGCGCTACCGCAGAT CTGGGACGAGCTGCGCAACAAGATCAACGATGCCCAGGGCGACCTGCCGCCGGGGATCGAACCGCCGCAGGTCAACGATG ATTTCGGCGACGTCTACGGCATCTTCTACGCGCTGACCGGCGATGGCCTGACGCTAAAGGAGCTCCACGAAACGACCAAG GATCTGCGCCGCGCGCTGGTGGCCGCCGACGGCGTCGGCAAGGTCGAGATCGCCGGCGTGCAGGAAGAGCGCATCCTCGT GGAAGTCGACCAGGCGCAGCTGGCCGCGATGGGCATCGCCCCCGACGAGATCGCGGCGGCGCTGGCCGATACCGATGCCG CGGTAGATGCCGGCGGCGTGCATGCCGGCGAGTACTTCGTGCGCCTGCGCCCGAGCGGCGCCTTCGATTCGCTCGAAGAG CTGCGCGCATTGCCGGTCGGCCAGGGCGCGCAGCGGGTCGAGCTGGGCGCCATCGCCAAGCTGTCGCGCGACTACGCCGA GCGGCCGCGGCAGATCATCCGCCACAACGGCCAGGCGGCACTAACCCTGGGCGTCAGCGGGGTCTCGGGAGCGAATATCG TCGAGGTCGGACACAGCGTCGAAGCGGCGTTGCAGGCCATCGAACACCGCATGCCACTGGGCGCCGAACTGCATCCGCTG TACGAGCAGCACCAGATCGTCGATGAGTCGGTGAACAGCTTCGCGCTCAACGTGTTCCTCTCGGTGGCCATCGTGGTCGG CGTGCTGTGCATCGCCATGGGTCTGCGCGCCGGCGTCATCATTGGCGCGGTGCTGTTTCTCACCGTGCTCGGCACGCTGC TGGTGATGTGGCTGGCGGGCATCGAGTTGGAGCGAATTTCCCTCGGCGCACTGATCATCGCCATGGGCATGCTGGTCGAC AATGCGGTCGTGGTCTGCGACGGCATGCTGGTGCGCCAGCGCCAGGGCAAGAGCATCCTCGAAGCCTCACAGGAAACGCT GCATCAGACGCAGTGGCCGCTGCTCGGCGCCACCATCATCGGCATCCTCGCCTTCGCCGGCATTGGTCTATCCCAGGACA CCACCGGCGAGTTCCTCTTCTCGCTGTTCTTCGTCATCGCCGTGTCGCTGCTGCTCAGCTGGCTGCTGGCGTTGCTGCTG GTGCCGCTGTTCGGTCATTACCTGCTGCGCAACGCCAAGACCGACGAGGACCCCGACGCCGCCTACGACGGCCCCTGGTA CAACCGCTACCGCCGACTGGCCGGCGGAGTGCTGCATCGGCCCTGGCTGACGGTCGGCGTGCTAGTAGTGCTGACGGTGG TCAGTATGGTGCTGTTCACCCGCTTGCCGCAGAGCTTCTTCCCGCCGTCGAGCACGCCGCTTTTCTACGTCAATCTGTTC CTGCCACAGGGCACGCATATTCGCGAGACCGCAGAGACCGCCTCTGACGTGGAGGCGTATTTGGCGGAGCTGGAGGGGGT AAGCGAGGTGTCCAGCTTCATCGGCGCCGGAGCCTCGCGCTTCATGCTGACCTATATGCCGGAGCAGCCGAATTCGTCGC TGATGCACTTTCTCGTGCGCACCGAGGATGCCGAGCTGATCGCCGGGCTGGTGAGGCAGATCAACCAGCAGCTGCCACAA CGCTATCCCTCGGCCGACGTCTCGGCTGCGCAGTTCATGTTCGGCCCCAATGCCGAGGCCAAGCTGGAAGCGCGCATCAG CGGCCCGGACATCGAGGTGCTGCGGGCCATTTCCGCCGAAGGCCGCAAGCGCCTGCAGGATGAGGGCAAGGTTTTCAACG TGCGCGACGACTGGCGCCAGCAGGTACTGGTGCTCCGCCCGCAACTGGCGCTGGATCGCCTCGCCGATGCCGGCCTGACG CGCCAGGCCGTGGCACGTGCCCTGGCCGCCGGCAGCGAAGGCCAACGGGTCAGCCTGCTGCGCGAGCGCGACGAGCTGAT CCCGGTATTGCTGCGCGCCGCGCCGGAGGACCGCATCGATAGCGGTGACCTGCTGCAACGCCTGATCTGGAGCCCCGCCG GCACCGGCTACGTGCCACTGGCGCAGGTCGCCGACAGCATCGAGCCGGTCAGCGAGGACAGCATCATCGTGCGCTACGAC CGCGAGCGGACGATCTCCATCCGCGCCGACCCGCGCGACGGCGAGAACACCAACGCGGCACACGAGCGCATTCGCCCGCT GATCGAGGGCATCGAGCTGCCGGTCAACTACAGCCTGAAATGGGGCGGCGACTACGAACAGTCTTCCGAGGCCCAGCAGG CGCTGGCCAGCACGCTGGCGGTGCCCTACCTGGCAATGGTGCTGGTCACCGTGCTGCTGTTCGCCAGGGTGCGCCAGCCG CTGATGATCTGGCTGGTGGTGCCCATGGCGATCTGCGGGGTGAGCTTCGGCCTGCTGCTCACCGGTCAGGCGTTCGGCTT CATGGCACTGCTCGGCCTGCTCAGCCTGACCGGCATGCTGATCAAGAACGCCGTGGTGCTGGTGGACGAGATCGACCGGC AGATCGACGACGAGGTGCCGCGCCTGACCGCCATCATCGAAGCCTCGGCGTCGCGCCTGCGACCGGTGATGATGGCCGCC GGCACCACCGTACTGGGCATGGTGCCGCTGCTGTTCGACCCGTTCTTCGCCAACATGGCGGTTACCATCATGGGCGGCCT GGGCTTCGCCACGTTGCTGACGCTGCTGGCGGTGCCGTGCCTGTACCTGCTGTTCATGAAAGTGCGCCCGGAGGAAACCG CATGA Protein sequence : MDFARYAITRPVNIWILILICLLGGTLAFFEIGRLEDPEFTIKQAIVNVQYPGATALEVEQQVTEPLESAIQQMSQIKEL RSRSMPGIAEIRVEMQDRYDGDALPQIWDELRNKINDAQGDLPPGIEPPQVNDDFGDVYGIFYALTGDGLTLKELHETTK DLRRALVAADGVGKVEIAGVQEERILVEVDQAQLAAMGIAPDEIAAALADTDAAVDAGGVHAGEYFVRLRPSGAFDSLEE LRALPVGQGAQRVELGAIAKLSRDYAERPRQIIRHNGQAALTLGVSGVSGANIVEVGHSVEAALQAIEHRMPLGAELHPL YEQHQIVDESVNSFALNVFLSVAIVVGVLCIAMGLRAGVIIGAVLFLTVLGTLLVMWLAGIELERISLGALIIAMGMLVD NAVVVCDGMLVRQRQGKSILEASQETLHQTQWPLLGATIIGILAFAGIGLSQDTTGEFLFSLFFVIAVSLLLSWLLALLL VPLFGHYLLRNAKTDEDPDAAYDGPWYNRYRRLAGGVLHRPWLTVGVLVVLTVVSMVLFTRLPQSFFPPSSTPLFYVNLF LPQGTHIRETAETASDVEAYLAELEGVSEVSSFIGAGASRFMLTYMPEQPNSSLMHFLVRTEDAELIAGLVRQINQQLPQ RYPSADVSAAQFMFGPNAEAKLEARISGPDIEVLRAISAEGRKRLQDEGKVFNVRDDWRQQVLVLRPQLALDRLADAGLT RQAVARALAAGSEGQRVSLLRERDELIPVLLRAAPEDRIDSGDLLQRLIWSPAGTGYVPLAQVADSIEPVSEDSIIVRYD RERTISIRADPRDGENTNAAHERIRPLIEGIELPVNYSLKWGGDYEQSSEAQQALASTLAVPYLAMVLVTVLLFARVRQP LMIWLVVPMAICGVSFGLLLTGQAFGFMALLGLLSLTGMLIKNAVVLVDEIDRQIDDEVPRLTAIIEASASRLRPVMMAA GTTVLGMVPLLFDPFFANMAVTIMGGLGFATLLTLLAVPCLYLLFMKVRPEETA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 7e-148 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A458_03335 | YP_006456344.1 | RND efflux transporter | BAC0519 | Protein | 3e-162 | 44 |
| A458_03335 | YP_006456344.1 | RND efflux transporter | BAC0428 | Protein | 3e-159 | 44 |
| A458_03335 | YP_006456344.1 | RND efflux transporter | BAC0425 | Protein | 3e-148 | 41 |
| A458_03335 | YP_006456344.1 | RND efflux transporter | BAC0526 | Protein | 2e-157 | 41 |
