Gene Information

Name : A458_03240 (A458_03240)
Accession : YP_006456325.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 721797 - 724361 bp
Length : 2565 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGCGTATCGATCGTTTGACCAGCAAGCTGCAGCTTGCGCTCTCCGATGCCCAGTCCATAGCCGTCGGCCTGGATCACCC
CTCCATTGAGCCGTTACACCTGATGCAGGCGCTGCTTGAGCAGCAGGGCGGCTCGATCAAACCGTTGCTGATGCAGGTCG
GCTTCGACATCGCAGCGCTGCGTCAGGCGCTGACCAAAGAGCTCGACCAGCTGCCGAAGCTACAGAACCCCACCGGCGAC
ATGAATCTCTCGCAGGACCTCGCGCGCCTGCTCAATCAGGCTGACCGCCTCGCCCAGCAGAAGGGCGACCAATACATTTC
CAGTGAGTTGGTGCTGCTGGCAGCGCTGGACAGCAACACCCGTCTGGGCAAGCTGCTGCTGGCGCAGGGTGTAAGCAAGA
AAGCGCTGGAGAACGCCATCAGCAATCTGCGCGGCGGCGATGCGGTCAACGATCCCAACGCCGAAGAATCGCGGCAGGCG
CTCGACAAATACACCGTGGACATGACCAAGCGCGCCGAGGACGGCAAGCTCGACCCGGTGATCGGTCGTGACGACGAGAT
CCGCCGCACCATTCAGGTGCTGCAGCGGCGGACCAAGAACAACCCGGTACTGATCGGTGAGCCGGGCGTGGGCAAGACCG
CCATCGTCGAGGGGCTGGCCCAGCGAATCGTCAACGGTGAGGTCCCGGACGGGCTCAAGGACAAGCGCTTGCTGGCCCTG
GACATGGGCTCGCTGATTGCCGGGGCCAAGTTCCGCGGCGAGTTCGAGGAGCGCCTCAAGGCGGTGCTCAACGAGCTGTC
CAAGCAGGAGGGTCGCGTCATCCTGTTCATCGACGAGCTGCATACGATGGTCGGCGCGGGCAAGGCGGAAGGCGCCATGG
ATGCCGGCAACATGCTCAAGCCTGCCCTGGCGCGCGGCGAGCTGCACTGCGTAGGTGCCACTACTCTCGATGAATACCGC
CAGTACATCGAGAAGGATGCCGCCCTGGAGCGGCGCTTCCAGAAGGTGCTGGTCGACGAGCCGAGCGAGGAGGACACCAT
CGCCATCCTCCGTGGCCTCAAGGAGCGCTACGAAGTGCACCATGGCGTGACCATCACCGATGGCGCCATCATCGCCGCGG
CCAAGCTCAGCCACCGCTATATCACCGATCGCCAGCTGCCGGACAAGGCCATCGACCTGATCGACGAGGCCGCCAGTCGT
ATCCGCATGGAGATCGACTCCAAGCCCGAAGAGCTCGACCGCCTGGATCGCCGCTTGATCCAGCTGAAGATCGAGCGTGA
GGCGCTGAAGAAGGAAGACGACGAGGCCACCAAGAAGCGCCTGGCCAAGCTGGAAGACGACATCGCCAAGCTGGAGCGCG
AATACGCCGATCTGGAAGAAATCTGGAAGTCGGAGAAAGCCGAGGTGCAGGGTTCGGCGCAGATCCAGCAGAAGATCGAA
CAAGCCAAGGCCGAGCTCGAAGCAGCGCGGCGCAAGGGTGATCTGGCGCGCATGGCCGAACTGCAGTACGGCATCATTCC
GGACCTCGAGCGCAGCCTGGAGATGGTCGATCAGCATGGCAAGAAAGAAAACCAGCTGCTGCGTAACAAGGTGACCGACG
AGGAGATCGCCGAGGTGGTTTCCAAGTGGACCGGTATTCCGGTCTCCAAGATGCTCGAAGGCGAGCGCGACAAGCTGCTG
CGCATGGAAGACATGCTGCACACTCGCGTCATCGGTCAGCACGAAGCCGTGGTGGCCGTATCCAATGCCGTGCGCCGCTC
GCGCGCCGGGCTGGCCGACCCGAATCGTCCGAGCGGCTCGTTCCTCTTTCTCGGCCCGACCGGGGTGGGCAAGACCGAGC
TTTGCAAGGCGCTGGCCGAGTTCCTCTTCGATACCGAGGAGGCGATGATCCGCATCGACATGTCCGAGTTCATGGAGAAG
CACTCCGTTGCGCGCCTGATCGGTGCGCCGCCGGGCTACGTCGGTTACGAAGAAGGCGGTTACCTGACCGAAGCGGTGCG
TCGCAAACCGTATTCGGTGGTGTTGATGGACGAGGTAGAGAAGGCCCATCCAGACGTCTTCAATGTGTTGCTGCAGGTGC
TCGAAGACGGCCGCCTGACCGACAGTCATGGGCGGACGGTGGACTTCAAGAACACGGTGATCGTGATGACCTCCAACCTG
GGCTCTGCGCAGATCCAGGAGCTGGTTGGTGATCCCGATGCGCAGCGGGCTGCGGTGATGGATGCGGTGGCGCATCACTT
CCGACCGGAGTTCATCAACCGTATCGACGAGGTGGTGGTGTTCGATCCGTTGGGTCGCGAGCAGATCGCCGGTATCGCCG
ACATCCAGCTCGGGCGCTTGCGCAAGCGTCTGGCCGAGCGCGAGCTGAGCCTGGAGCTCAGTCAGGAGGCGATGGACAAG
CTGATCGCCATCGGTTACGACCCGGTCTACGGAGCACGGCCGCTCAAACGGGCGATCCAGCGCTGGATCGAGAATCCGCT
GGCGCAGCAGATTCTCTCCGGTCAGTTCGCGCCGGGCAGCAGCGTCAAGGCGCGGGTAGAGGGCGAGCAGATCGTCTTCG
ATTGA

Protein sequence :
MRIDRLTSKLQLALSDAQSIAVGLDHPSIEPLHLMQALLEQQGGSIKPLLMQVGFDIAALRQALTKELDQLPKLQNPTGD
MNLSQDLARLLNQADRLAQQKGDQYISSELVLLAALDSNTRLGKLLLAQGVSKKALENAISNLRGGDAVNDPNAEESRQA
LDKYTVDMTKRAEDGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLAL
DMGSLIAGAKFRGEFEERLKAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR
IRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKKRLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIE
QAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVDQHGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGERDKLL
RMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMIRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNL
GSAQIQELVGDPDAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLELSQEAMDK
LIAIGYDPVYGARPLKRAIQRWIENPLAQQILSGQFAPGSSVKARVEGEQIVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 8e-101 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-101 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_03240 YP_006456325.1 ClpB protein VFG2076 Protein 3e-104 44