Gene Information

Name : A458_02320 (A458_02320)
Accession : YP_006456143.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Resistance
Product : multidrug efflux SMR transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 507986 - 508318 bp
Length : 333 bp
Strand : -
Note : COG2076 Membrane transporters of cations and cationic drugs

DNA sequence :
ATGTCCGGTTACATTTACCTGGCCATCGCCATCTGCGCCGAAGTGGTCGCCACCACTTCGATGAAAGCCCTGGCCGGCTT
CAGCCGCCCGCTGCCCCTGTTGCTGGTGATTTGTGGCTATAGCCTGTCGTTCTGGATGCTGGCGCTGGTGGTGAAGACCA
TTCCGGTGGGGATCGCCTACGCCATCTGGGCGGGCCTGGGCATCGTGCTGGTCAGCATTGCTGCGGCGTTGATCTATCGT
CAGCACCTAGACCTGCCGGCGGTGCTCGGCATGGCGTTGATCATCACTGGCGTGGTGGTCATTCAGCTGTTCTCCGACAG
CACCGGCCACTGA

Protein sequence :
MSGYIYLAIAICAEVVATTSMKALAGFSRPLPLLLVICGYSLSFWMLALVVKTIPVGIAYAIWAGLGIVLVSIAAALIYR
QHLDLPAVLGMALIITGVVVIQLFSDSTGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 2e-16 47
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 2e-16 47
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-16 47
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 2e-16 47
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-16 47
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 2e-16 47
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 2e-16 47
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 2e-16 47
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 3e-16 47
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 2e-16 47
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 47
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 3e-16 47
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 47
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 3e-16 47
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 47
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 3e-16 47
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 2e-16 47
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 2e-16 47
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 47
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 3e-16 47
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_02320 YP_006456143.1 multidrug efflux SMR transporter CP004022.1.gene1549. Protein 3e-27 61
A458_02320 YP_006456143.1 multidrug efflux SMR transporter BAC0377 Protein 7e-28 58
A458_02320 YP_006456143.1 multidrug efflux SMR transporter NC_002695.1.913273.p Protein 1e-18 55
A458_02320 YP_006456143.1 multidrug efflux SMR transporter BAC0150 Protein 2e-18 54
A458_02320 YP_006456143.1 multidrug efflux SMR transporter BAC0002 Protein 4e-23 52
A458_02320 YP_006456143.1 multidrug efflux SMR transporter NC_010410.6003348.p0 Protein 4e-23 52
A458_02320 YP_006456143.1 multidrug efflux SMR transporter CP001138.1.gene1489. Protein 9e-20 51
A458_02320 YP_006456143.1 multidrug efflux SMR transporter BAC0324 Protein 5e-21 50
A458_02320 YP_006456143.1 multidrug efflux SMR transporter BAC0322 Protein 1e-20 47
A458_02320 YP_006456143.1 multidrug efflux SMR transporter BAC0323 Protein 8e-17 47
A458_02320 YP_006456143.1 multidrug efflux SMR transporter BAC0192 Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_02320 YP_006456143.1 multidrug efflux SMR transporter VFG1586 Protein 6e-18 43