Gene Information

Name : A458_21605 (A458_21605)
Accession : YP_006459955.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator CzrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4664473 - 4665147 bp
Length : 675 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATCCTGGTTGTCGAAGACGAGATCAAAGCTGCGGAATACTTGCAGCAGGGTCTTATCGAATGTGGTTACTTGGT
CGATTGCGTAAGTGATGGCCTCGATGGGTTTCACCTGGCACTGCAGAACGACTATGACATCGTGCTGCTAGATGTGAATC
TGCCAACCATGGATGGGTGGGAGGTTCTCGAACTCATCAGGCGGCGTAAGCAGACACGCGTCATCATGCTGACTGCCAAT
GGCCGCTTAGAGCAAAAAGTCCGCGGCTTGGAATCGGGCGCCGACGACTATCTGGTCAAGCCGTTCCAGTTCCCCGAGCT
GCTTGCCCGTATCCGGACACTGTTGCGGCGAGGCGAGGCAGTCACACTTCCGAGCAACCTGCGTGTAGCCGACCTCGAAC
TGGACCCGGCCCGGCATAGGGCTTACCGGAGCGGTCAGCGTATCGACCTCACCAGCAAAGAATTTGCGTTATTGCATCTG
CTCATGCGCCGGACTGGCGAAGTCCTCACGCGTACGGAAATAACTGCCATGGTGTGGGACATCAATTTCGACTGCGATAC
CAACGTGGTAGATGTCGCGATTCGCCGCCTGCGGATGAAGGTGGACGAACCCTTTGGCGATCGCCTGATACACACTATCC
GGGGTGTGGGCTACGTGCTGGAGGCGCGGCCTTGA

Protein sequence : 
MRILVVEDEIKAAEYLQQGLIECGYLVDCVSDGLDGFHLALQNDYDIVLLDVNLPTMDGWEVLELIRRRKQTRVIMLTAN
GRLEQKVRGLESGADDYLVKPFQFPELLARIRTLLRRGEAVTLPSNLRVADLELDPARHRAYRSGQRIDLTSKEFALLHL
LMRRTGEVLTRTEITAMVWDINFDCDTNVVDVAIRRLRMKVDEPFGDRLIHTIRGVGYVLEARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-56 53
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-56 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR BAC0125 Protein 1e-63 59
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR BAC0197 Protein 9e-61 57
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR BAC0638 Protein 8e-54 56
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR BAC0083 Protein 3e-58 55
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR BAC0111 Protein 3e-62 55
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR BAC0308 Protein 1e-54 53
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR BAC0347 Protein 3e-59 53
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_007793.3914065.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_002758.1121390.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_010079.5776364.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_002952.2859858.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_007622.3794948.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_003923.1003417.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_013450.8614146.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR NC_002951.3238224.p0 Protein 5e-34 43
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR AE015929.1.gene1106. Protein 1e-29 41
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR U82965.2.orf14.gene. Protein 5e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR VFG0596 Protein 6e-57 53
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR VFG0473 Protein 3e-28 42
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR VFG1390 Protein 6e-35 42
A458_21605 YP_006459955.1 DNA-binding response regulator CzrR VFG1389 Protein 2e-34 42