Gene Information

Name : A458_21470 (A458_21470)
Accession : YP_006459930.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Unknown
Product : putative transposase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4635492 - 4635815 bp
Length : 324 bp
Strand : +
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
ATGAGAAAGACTACGACCTACTCCCCCGAAGTCCGTGAACGTGCTGTGCGCATGGTTCTGGAGCACCTGAACGACTACCC
CTCCGAGTGGGCGGCCATTGAGGCCATCGCCCCGAAGATTGGTTGTGCAGCGCAAACCCTGCATGGCTGGATTCGTCGCC
ACCAGACTGATGCCGGTCAGCGTCCTGGGCCGACCACCGAAGAGCGCGAACGCATCAAAGCCCTGGAGCGTGAGAACCGT
GAGTTGCGCAAAGCCAACGAGATTCTGCGCCTGGCCAGTGCGTATTTTGCCCAGGCGGAGCTCGACCGCCGCACCAAGTC
CTGA

Protein sequence :
MRKTTTYSPEVRERAVRMVLEHLNDYPSEWAAIEAIAPKIGCAAQTLHGWIRRHQTDAGQRPGPTTEERERIKALERENR
ELRKANEILRLASAYFAQAELDRRTKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 2e-27 64
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 2e-27 64
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 2e-27 64
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 2e-27 64
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 1e-27 63
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 9e-28 63
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 9e-28 63
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 9e-28 63
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 9e-28 63
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-25 62
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 5e-25 62
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-23 62
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 3e-26 62
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-23 62
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 2e-23 62
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 3e-26 62
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 3e-23 62
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 2e-23 62
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 3e-26 62
unnamed AAF09023.1 unknown Not tested SHI-O Protein 4e-25 62
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-25 62
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 4e-25 62
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-25 62
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 3e-25 62
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 5e-25 62
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 2e-23 61
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-23 61
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 5e-24 61
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-23 60
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 5e-23 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_21470 YP_006459930.1 putative transposase subunit A VFG0643 Protein 1e-25 62
A458_21470 YP_006459930.1 putative transposase subunit A VFG1717 Protein 8e-24 62
A458_21470 YP_006459930.1 putative transposase subunit A VFG1603 Protein 5e-24 61
A458_21470 YP_006459930.1 putative transposase subunit A VFG0606 Protein 1e-24 61