Gene Information

Name : A458_19555 (A458_19555)
Accession : YP_006459549.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : mutant NtrC-like activator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4193672 - 4195060 bp
Length : 1389 bp
Strand : -
Note : COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

DNA sequence : 
ATGACTGAAGTGACGCAGGAGCGGGTCCTGCTGGTCGAGGACGACGACAGCCTGCGCCAGTTGCTGGTCGAGGAGCTGGA
AGATCGCGGCCTGCAGGTGCGCGCGCTGGCCAGTGCGGAGGAGGCGGTCGGCTCGCTGGAAAGCTGGGAGCCGGCGCTGG
TGGTCAGCGATCTGCGCCTGCCCGGTGCCGATGGCATGGCGTTGCTGCGACGGGTCAAGACGATGCAGGCGGCACCGGCA
TTTCTGGTGATCACCGCGTTCGGCAGCATCCAGCAGGCCGTGGCGGCGCTCAAGGAAGGCGCCGACGAATTCCTCACCAA
GCCGCTGGACCTCGAGCACTTCGCCCTGGCGGTGGCCCGTGCGCTGGAAACGCGACGCCTGCGCGACGAGGTACGGCGCT
TCCAGCAGCTGCTCAGCGACGACCGCTTCCACGGCATGCTTGGCCGTAGCCGGGTTATGCGCGGCTTGTTCGATCAGATC
CGCCAGCTTGCCCGCGCCGAGGGGCCGGTGCTGGTGATCGGCGAGAGCGGCACCGGCAAGGAGCTGGTCGCCCGCGCCGT
GCATGCGGAAAGCGAACGTGCCAAAGGGCCATTCCTCGCGATCAACTGCGCCGGGCTGCCGGCCGAATTGTTGGAAAGCG
AATTCTTCGGCCATGTCTCTGGCGCCTTCACCGGCGCCAACCGCGCGCACAAGGGACTTTTCCAGCAGGCCGACGGTGGC
ACGCTGTTTCTCGACGAGATCGGCGAGATGCCGCTGCCGCTGCAGGCCAAGCTCCTGCGCGTGCTGCAGGAAGGCACGAT
CCGCCCGGTGGGTGCCGAGCGTGAGCTGAGCGTGGATGTGCGCATCATCGCGGCGAGCAACCGCCCGCTGGAAACCGAGG
CCGGCCGTGAGGCCTTCCGCGAGGACCTGTTCTTCCGCCTGGAAACCTTCATCCTGCAGGTGCCGCCGCTGCGTGATCGC
GAGGAGGACCTCGAACTGCTGGCCGCCGGCTTCGTCGCCCACTTTGCCGCGCGCAGCGGGCGACCGGTGCGCGGCATCGC
GCCGGCGGCACTGGCGCAGCTGCGACGCTATCCGTTCCCGGGCAACGTGCGCGAACTGCAGAACGCCATCGAGCGTGCGG
TGACCTTCTGCCACGGGCGCAGCATCGAGCTGGAGCACCTGCCCAGCCGCATCGCCGACTATCGTGATGACAAGGCGCGC
AGTGCCGGCGCCGAACTGCTCGCTCAGCTCAGCGATGGCCCGCTGCTACCGACTCTGGAGGAGCTGGAGCTGCGTTATAT
CGAGCATGTGCTGAAGCTGGTGGACGGCAACAAGCGCCGCGCCGCGGCCCTGCTCGGCATCGGCCGGCGCACGTTGTACC
GTCGCCTCGGCGAGCGTGAAGACGGTTGA

Protein sequence : 
MTEVTQERVLLVEDDDSLRQLLVEELEDRGLQVRALASAEEAVGSLESWEPALVVSDLRLPGADGMALLRRVKTMQAAPA
FLVITAFGSIQQAVAALKEGADEFLTKPLDLEHFALAVARALETRRLRDEVRRFQQLLSDDRFHGMLGRSRVMRGLFDQI
RQLARAEGPVLVIGESGTGKELVARAVHAESERAKGPFLAINCAGLPAELLESEFFGHVSGAFTGANRAHKGLFQQADGG
TLFLDEIGEMPLPLQAKLLRVLQEGTIRPVGAERELSVDVRIIAASNRPLETEAGREAFREDLFFRLETFILQVPPLRDR
EEDLELLAAGFVAHFAARSGRPVRGIAPAALAQLRRYPFPGNVRELQNAIERAVTFCHGRSIELEHLPSRIADYRDDKAR
SAGAELLAQLSDGPLLPTLEELELRYIEHVLKLVDGNKRRAAALLGIGRRTLYRRLGEREDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-60 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-60 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_19555 YP_006459549.1 mutant NtrC-like activator BAC0467 Protein 4e-66 44
A458_19555 YP_006459549.1 mutant NtrC-like activator BAC0089 Protein 1e-73 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_19555 YP_006459549.1 mutant NtrC-like activator VFG1214 Protein 2e-70 44
A458_19555 YP_006459549.1 mutant NtrC-like activator VFG0116 Protein 5e-61 43
A458_19555 YP_006459549.1 mutant NtrC-like activator VFG1249 Protein 1e-53 42