Gene Information

Name : A458_19440 (A458_19440)
Accession : YP_006459532.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : two-component response regulator PhoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4175477 - 4176154 bp
Length : 678 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAGTGCTGGTGGTGGAAGACGAGGCGCTGCTGCGCCACCACTTGCAGACCCGACTCGGCGAAAGCGGGCATGTCGT
CGACGCCGTGCCCAACGCCGAGGAAGCGCTGTTTCAGACCCACGAATTCAACCATGACCTGGCCGTCATCGATCTCGGCC
TGCCGGGCATCAGCGGGCTGGACCTGATCCGCCAGCTGCGCAGCCGCGGCAAGAGCTTCCCCATTCTCATCCTTACCGCG
CGCGGCAACTGGCAGGACAAGGTCGAAGGCCTGGCCGCAGGCGCCGACGACTACGTGGTCAAGCCGTTCCAGTTCGAGGA
ACTGGAAGCCCGGTTGAACGCTCTGCTGCGCCGTTCCAGCGGCTTCACCCAGGCCACCATCGAAGCCGGCCCGCTGCTGC
TCGACCTCAATCGAAAGCAGGCCACGGCCAATGGCGCGCCGTTGGCGCTGACCGCCTACGAATACCGCATCCTCGAATAC
CTGATGCGTCATCAGCAGCAGGTGGTGGCCAAGGAGCGCCTGATGGAGCAGCTCTACAGCGGTGACGAGGAGCGCGATCC
GAACGTGATCGAAGTGCTGGTCGGCCGGCTGCGGCGCAAGCTGGAGGCGCAGTGCGCGATGAAGCCCATCGAAACCGTGC
GCGGCCTAGGCTATCTGTTCACCGAGCGCTGCCGATGA

Protein sequence : 
MKVLVVEDEALLRHHLQTRLGESGHVVDAVPNAEEALFQTHEFNHDLAVIDLGLPGISGLDLIRQLRSRGKSFPILILTA
RGNWQDKVEGLAAGADDYVVKPFQFEELEARLNALLRRSSGFTQATIEAGPLLLDLNRKQATANGAPLALTAYEYRILEY
LMRHQQQVVAKERLMEQLYSGDEERDPNVIEVLVGRLRRKLEAQCAMKPIETVRGLGYLFTERCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_19440 YP_006459532.1 two-component response regulator PhoP NC_002516.2.879194.p Protein 2e-82 86
A458_19440 YP_006459532.1 two-component response regulator PhoP CP000647.1.gene1136. Protein 4e-49 54
A458_19440 YP_006459532.1 two-component response regulator PhoP BAC0530 Protein 4e-49 54
A458_19440 YP_006459532.1 two-component response regulator PhoP CP001918.1.gene2526. Protein 8e-49 53
A458_19440 YP_006459532.1 two-component response regulator PhoP CP001138.1.gene1939. Protein 7e-50 53
A458_19440 YP_006459532.1 two-component response regulator PhoP CP000034.1.gene2022. Protein 2e-49 53
A458_19440 YP_006459532.1 two-component response regulator PhoP NC_002695.1.913289.p Protein 5e-48 52
A458_19440 YP_006459532.1 two-component response regulator PhoP CP004022.1.gene1005. Protein 7e-47 48
A458_19440 YP_006459532.1 two-component response regulator PhoP BAC0083 Protein 2e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_19440 YP_006459532.1 two-component response regulator PhoP VFG0475 Protein 7e-50 53