Gene Information

Name : A458_18770 (A458_18770)
Accession : YP_006459400.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4041346 - 4042092 bp
Length : 747 bp
Strand : -
Note : COG3279 Response regulator of the LytR/AlgR family

DNA sequence :
ATGAATGTCCTGATTGTCGATGACGAACCTCTAGCCCGCGAGCGCCTCAGCCGACTGGTAGGTGACCTCGACGGCTATCG
TGTCCTCGAGCCCGCTGCCAGCAATGGCGAAGAAGCACTGACGCTGATCGAGGAACTGCGCCCTGATGTCGTGCTGCTGG
ATATCCGCATGCCGGGGCTAGATGGCCTGCAGGTTGCAGCCAGGCTTTGCGAGACGGATGCGCCGCCTGCCGTGATCTTT
TGTACTGCCCATGATGAATTTGCTCTGGAGGCTTTCCAGGTCAGCGCGGTTGGCTATCTGGTCAAGCCGGTGCGCCCGGA
ACACCTCACCGAGGCCTTGAAGAAGGCGGAACGGCCGAACCGAGTGCAGCTCGCTGCGTTGACCCGGCCGGCAGCGGTTT
CCGGTGCCGGGCCTCGCACCCACATCAGCGCGCGTACCCGAAAGGGCATCGAGCTGATTCCGCTGGACCACGTGATCTAC
TTCATCGCCGACCACAAGTACGTCACCCTGCGCCATATCGGTGGCGAGGTGCTGCTGGACGAGCCGTTGAAGTCTCTGGA
AGACGAGTTCGGCGAGCGCTTCGTGCGTATCCACCGCAACGCGCTGGTGTTCCGTGATCGTATCGAGCGCCTGCAGCGCA
CGCCGCTCGGGCATTTCCAGCTGTTCCTCAAGGGGCTCGAGGGTGAGGCGCTGACGGTGAGCCGTCGCCATGTCGCCGGT
GTGCGCAAGCTGATGCAGAACCTCTGA

Protein sequence :
MNVLIVDDEPLARERLSRLVGDLDGYRVLEPAASNGEEALTLIEELRPDVVLLDIRMPGLDGLQVAARLCETDAPPAVIF
CTAHDEFALEAFQVSAVGYLVKPVRPEHLTEALKKAERPNRVQLAALTRPAAVSGAGPRTHISARTRKGIELIPLDHVIY
FIADHKYVTLRHIGGEVLLDEPLKSLEDEFGERFVRIHRNALVFRDRIERLQRTPLGHFQLFLKGLEGEALTVSRRHVAG
VRKLMQNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-51 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_18770 YP_006459400.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 4e-106 87