Gene Information

Name : A458_17570 (A458_17570)
Accession : YP_006459162.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3780933 - 3781598 bp
Length : 666 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGTCTGCTACTGGTCGAAGACAACGTTCCGCTGGCCGATGAACTGGTCGCCAGTCTCAGCCGCAACGGTTATGCCAT
CGACTGGCTGGCCGATGGCCGCGACGCCGGATACCAGGGCGCCAGCGAGCCCTATGACCTGATCATTCTCGACCTCGGCT
TGCCTGGCAAACCGGGGCTGGAGGTGCTGCGCGACTGGCGTGCCGGCGGCCTCACCACACCGGTGCTGATCCTTACCGCG
CGCGGCTCCTGGGCCGAGCGCATCGACGGTCTCAAGGCCGGCGCCGACGACTACCTGACCAAGCCCTTTCATCCCGAAGA
ACTGCTGCTGCGCATCCAGGCGCTGCTGCGCCGTGCCCATGGCCTGGCCAACCAGCCCATGTTGCAGGCCGGCGGCCTGG
AGCTGGACGAGTCGCGCCAGTGCTGTCGCAAGGATGGTCAGGACATCGAACTCACCGCCGGAGAATTCCGCCTGCTGCGC
TATTTCATGCTGCATCCGGGGCAGCTGCTGTCGAAAACCCAGCTGACCGAACACCTGTACGACGGTGAAACCGAGCGCGA
TTCAAACGTCATCGAGGTGCATATCAACCGGCTGCGCGGCAAGCTCGGCCGCGAGCTGATCGAAACGCGCCGCGGCCAGG
GCTATCGCTTCGGCGGCCAGCCGTGA

Protein sequence : 
MRLLLVEDNVPLADELVASLSRNGYAIDWLADGRDAGYQGASEPYDLIILDLGLPGKPGLEVLRDWRAGGLTTPVLILTA
RGSWAERIDGLKAGADDYLTKPFHPEELLLRIQALLRRAHGLANQPMLQAGGLELDESRQCCRKDGQDIELTAGEFRLLR
YFMLHPGQLLSKTQLTEHLYDGETERDSNVIEVHINRLRGKLGRELIETRRGQGYRFGGQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_17570 YP_006459162.1 two-component response regulator NC_002516.2.879194.p Protein 5e-37 46
A458_17570 YP_006459162.1 two-component response regulator BAC0083 Protein 4e-30 43
A458_17570 YP_006459162.1 two-component response regulator CP004022.1.gene1005. Protein 1e-33 42
A458_17570 YP_006459162.1 two-component response regulator CP000647.1.gene1136. Protein 5e-30 42
A458_17570 YP_006459162.1 two-component response regulator BAC0530 Protein 5e-30 42
A458_17570 YP_006459162.1 two-component response regulator CP000034.1.gene2022. Protein 5e-30 41
A458_17570 YP_006459162.1 two-component response regulator CP001918.1.gene2526. Protein 7e-30 41
A458_17570 YP_006459162.1 two-component response regulator CP001138.1.gene1939. Protein 5e-31 41
A458_17570 YP_006459162.1 two-component response regulator BAC0638 Protein 2e-24 41
A458_17570 YP_006459162.1 two-component response regulator BAC0487 Protein 5e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_17570 YP_006459162.1 two-component response regulator VFG0475 Protein 5e-31 41
A458_17570 YP_006459162.1 two-component response regulator VFG0473 Protein 2e-29 41