Gene Information

Name : A458_17220 (A458_17220)
Accession : YP_006459092.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : response regulator, transcriptional regulatory protein (two-component), ColR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3705876 - 3706559 bp
Length : 684 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATTCTGGTCATCGAAGACAACCGCGACATCCTGGCTAACGTCCTGGACTACCTGGAGCTCAAAGGCTATGTGGT
CGATTGCGCTCAGGACGGACTAAGCGGCCTGCATCTGGCTGCCACCGAGCACTACGACCTGATCGTGCTGGACATCATGT
TGCCTGGCATCGATGGGCTGCAGGTCTGCAAACGGCTGCGGGACGATGCCGGGCGGGACACCCCGATCATCATGCTAACG
GCCCGTGATGCGCTTAATGATCGGCTGCAAGGGCTGGGTGCCGGCGCCGACGACTACCTGATCAAGCCGTTCGCGCTGTC
GGAGCTGGTCGCCCGTATCGAGGCGATCCTGCGGCGCAGCCAGGGCTCGCGCAAACACAAACTGCATGTCGGTGATCTGC
ACTATGACCTCGATACCCTCCAGGCAACCCGCGCCGGGCAGCCGCTGCGATTGAATCCCATCGGCCACAAACTGCTGGCG
ATCCTCATGCAGAAAAGCCCGGCGGTGGTGCGGCGCGAGCAGTTGGAGGAAGCGCTCTGGGGCAATGATGTTCCCGACAG
CGACAGCCTGCGCAGCCATATTCACCAGCTACGCCAGGTACTCGACAAGCCGTTCGCGGCACCACTGCTGCACACCGTGC
ATGGCGTCGGTTTCCGTCTCGCGGAGCCTGAGCATGCTGGCTAA

Protein sequence : 
MRILVIEDNRDILANVLDYLELKGYVVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGLQVCKRLRDDAGRDTPIIMLT
ARDALNDRLQGLGAGADDYLIKPFALSELVARIEAILRRSQGSRKHKLHVGDLHYDLDTLQATRAGQPLRLNPIGHKLLA
ILMQKSPAVVRREQLEEALWGNDVPDSDSLRSHIHQLRQVLDKPFAAPLLHTVHGVGFRLAEPEHAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-37 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_17220 YP_006459092.1 response regulator, transcriptional regulatory protein (two-component), ColR BAC0197 Protein 9e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_17220 YP_006459092.1 response regulator, transcriptional regulatory protein (two-component), ColR VFG0596 Protein 4e-38 43
A458_17220 YP_006459092.1 response regulator, transcriptional regulatory protein (two-component), ColR VFG1389 Protein 1e-28 42
A458_17220 YP_006459092.1 response regulator, transcriptional regulatory protein (two-component), ColR VFG0473 Protein 6e-32 41