Gene Information

Name : A458_16750 (A458_16750)
Accession : YP_006458998.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : putative outer membrane receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3608541 - 3610745 bp
Length : 2205 bp
Strand : +
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGTCTATCCCCTTCGCACGTACCGCCCTGTCCTGCGCCATGATCGGCTGCAGCTGGACGGCTCTCGCCCAGAACGCGCC
TGTCACGCTCAACGACACGGTCGTCAGCGCCTCCGGCTTCGAACAGAAGATCACCGAAGCACCGGCCAGCATCAGCGTCA
TCAGCCGTGAAGACCTGCAGCAGAAGCGCTACAACAACCTGGCGCAGGCACTGGGCGACGTGGAAGGCATCGACATCGGC
CAGGGCACCGGCAAGACCGGCGGGCTCAACATCAGCATTCGCGGCATGCCCAGCCAGTACACCCTGATCCTCATCGACGG
CCGTCGACAGAACGCCGCAGGCAATGTCACGCCAAACGGCTTCAACGAAACCTCCACCAGCTTCATGCCGCCGCTGTCGG
CCATCGAGCGCATCGAAGTGATCCGTGGCCCGATGTCGACGCTCTACGGCTCCGACGCCATGGGCGGGGTGATCAACATC
ATCACCCGCAAGGTCGGCAAGGAGTGGACCGGCTCGCTGACACAGGATTACACCTACCAGCAAGATCGCGACTTCGGCGA
CACCCGCAACACCAGTGTCTACGCCAGTGGTCCGCTGGTCGACGGCCTGCTCGGTCTGCAGGTCCGCGGCAGCCTGTTTG
ATCGCCAGGAGTCGGACCTTAGCTACGGCAATGGCATCGACGTCAGCAAGCGCGGCCCCTCGCCCGTCGACGGTCGCAAC
CAGAACATTGGCGCCCGCCTGGCCCTAACCCCGCACCAGGACCACGACTTCGCGCTGGATATCGAGCGTGGACGGCAGGC
ATACAACAACGACGAATGCCAGCTCGGCACCCTCGACGGCTTGAACAGGGCTTGTAGCGCACCGGATACCGCCGCGAACG
GCTATGACGACGAGCTTCGCTTCGAGCGCGAACAGATCGCCCTGACCCACACCGGCCGCCTCGGCTTCGGCACGCTGGAT
TCCAGCCTGATGCACAACACCACCGAAACCTTCGGCCGGACCATTCCCGGCACCATCGGTGCGCCGACCGCCGTACCCGG
GGCAATCGGCGGCGACGATCGCGAGCTGGAAACCACCAACCTGGTCTTCGACACCAAGCTGGTTGCCCCGATCGGCAAAT
CGCACATCGCCACCGTAGGCGGCCAATGGTGGAAAGCCGAAATGACCGATGGCATCGCCCAGACGGAATTCGAGCAGAAG
ACCTGGGCACTGTTTGCCGAAGATGAGTGGCGCCTGCGCGATGATCTGGCCCTGACCCTGGGCGCCCGCTATGACGACCA
CGAGTCCTTTGGTGGACATGTCAGCCCGAGGGCTTACCTGGTCTGGAACACCACCGACAACTGGACCCTCAAGGGCGGCA
TCAGCAAGGGCTACAAGACGCCGGACCTGAACGACCTGCACGGCGGCATCAATGGCGTAACCGGCCAGGGCTCCATCATC
ACCATCGGCAACCCGGACCTGGACCCCGAAACGACCGCCAGTACCGAGATCGGTGCCTATTTCGACAGCCTGACCGGCTT
CAGCGCCAACGCCACGCTGTTCCACAACAAGTTCAAGGACAAGATCGCCAGCGGCGACCCGATCACCGATCCACTGTGCG
CAGGCAACAACAACGGCACCTGCTCGCAGCAGATCAACGTCGACGAAGCGGTGACCCGTGGCCTGGAGCTGGCTGGCAGC
TGGCAGTTCGCACCAGCCTGGAAACTGAGCGCCAACTACACCTACACCGACAGCGAGCAGAAGAGTGGCGATAACCAGGG
AGAGCCGCTGACCAACACGCCCGAACACCTGGCCAACGCCAAACTCGACTGGCAGACCACCGACCGTCTGGGCCTGTGGC
TGAAGAGCGAGTACCGCGGTGAGCGCGCGCGCTTCACCTCCAGCTACGAGAATCTCGCTAACGCCAACGGCAGCTACTCC
ACCAGCCAGTCGATCTACGACACGCTGGGCAAGAACGCCAAGGCATACACGCTGTTTCACCTGGGCGGGTCGTATCGGGC
TACGGAGAACCTGACGCTCAACGCGACGATCTACAACCTCTTCGACAAGGACTTCGTCGACGGCAAGGCCTACACCACCT
ATTCCAATGGCGGGAGCGCAAACGGCACGGCCTACGGCACCGACTACAGCCACTCCGGCGCCGCCACCACCGGTATCGTG
GAAGAAGGCCGCCGCCTGTGGCTGTCAGCCAACCTGACCTTCTGA

Protein sequence :
MSIPFARTALSCAMIGCSWTALAQNAPVTLNDTVVSASGFEQKITEAPASISVISREDLQQKRYNNLAQALGDVEGIDIG
QGTGKTGGLNISIRGMPSQYTLILIDGRRQNAAGNVTPNGFNETSTSFMPPLSAIERIEVIRGPMSTLYGSDAMGGVINI
ITRKVGKEWTGSLTQDYTYQQDRDFGDTRNTSVYASGPLVDGLLGLQVRGSLFDRQESDLSYGNGIDVSKRGPSPVDGRN
QNIGARLALTPHQDHDFALDIERGRQAYNNDECQLGTLDGLNRACSAPDTAANGYDDELRFEREQIALTHTGRLGFGTLD
SSLMHNTTETFGRTIPGTIGAPTAVPGAIGGDDRELETTNLVFDTKLVAPIGKSHIATVGGQWWKAEMTDGIAQTEFEQK
TWALFAEDEWRLRDDLALTLGARYDDHESFGGHVSPRAYLVWNTTDNWTLKGGISKGYKTPDLNDLHGGINGVTGQGSII
TIGNPDLDPETTASTEIGAYFDSLTGFSANATLFHNKFKDKIASGDPITDPLCAGNNNGTCSQQINVDEAVTRGLELAGS
WQFAPAWKLSANYTYTDSEQKSGDNQGEPLTNTPEHLANAKLDWQTTDRLGLWLKSEYRGERARFTSSYENLANANGSYS
TSQSIYDTLGKNAKAYTLFHLGGSYRATENLTLNATIYNLFDKDFVDGKAYTTYSNGGSANGTAYGTDYSHSGAATTGIV
EEGRRLWLSANLTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 7e-133 46
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 8e-134 45
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 8e-134 45
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 6e-134 45
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 6e-134 45
iha AAF36432.2 adhesin Virulence TAI Protein 4e-134 45
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 6e-135 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_16750 YP_006458998.1 putative outer membrane receptor VFG1731 Protein 3e-134 45