Gene Information

Name : murD (A458_16340)
Accession : YP_006458916.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.2.9
Position : 3530446 - 3531789 bp
Length : 1344 bp
Strand : -
Note : COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase

DNA sequence :
GTGCTCATCGCTTCCGACCAGTTCCGCATCGTTGTCGGCCTCGGCAAGAGCGGCATGTCCCTGGTTCGCCATCTGGCGCG
CCGGGGCCTGCCGTTTGCCGTCGCTGATACCCGTGTGAACCCACCGGAGTTGGCGACGCTCAAGGCCGAGTATCCAGACG
TGCAAGTGCGCTGTGGCGAGCTGGACGTCGAGTTTCTCTGCACCGCCAGCGAGCTGCTGGTGAGCCCGGGCCTGGCGGTC
AGTACGCCGGCGCTGCAGGAAGCCGCGGCGCGTGGGGTCAAGCTGTCCGGTGATATCGAGCTGTTCGCCCGCGAAGCCAA
GGCGCCGATCATTGCGATCACCGGCTCCAACGCCAAGAGCACCGTGACCACGCTGGTCGGCGAGATGGCCGTGGCGGCAG
GGCGCACCGTGGCGGTTGGTGGCAACCTGGGCACGCCGGCGCTTGATCTGCTGGCAGACGACGTCGAGCTTTATGTGCTG
GAGCTGTCCAGCTTTCAGCTGGAGACCACCGAGCAGCTCAATGCCGAAGTGGCGACCTGCCTGAACATCAGCGAAGACCA
TATGGACCGCTACAGCGGCCTGCCAGCCTACCATCAGGCCAAACACCGAATTTTCCGCGGCGCGCGTCAGGTGGTGGTCA
ATCGCGATGACCGGCTCAGCCGTCCGCTGGTCGCGGATGACCTGCCGACCTGGACCTTCGGCCTCGGCAAGCCGGACTTC
AAGGGCTTTGGGCTGTTCGAGGAAAAAGGCGAGAAGTACCTGGCGTTCCAGTTCGATGCGCTGATGCCGGTTCGCGAGCT
GAAGATGCGTGGTGCGCACAATCAGTCCAATGCTCTGGCAGCGCTGGCGCTGGGGCACGCGGTGGGTCTGCCGTTCGAGC
CGATGCTGGAGACGTTGCGCCAGTTCGTCGGTTTGCCGCATCGCTGCCAGTGGGTTGGCCAGCGTGGCGACGTCAGCTAT
TACGACGATTCCAAGGCCACCAATGTCGGTGCCGCGCTGGCTGCGATCGAAGGCCTGGGTGCGGATATCGACGGCAAGCT
GGTGCTGATCGCCGGTGGCGATGGCAAGGGCGCAGACTTCTCCGCGCTGCGCGCGCCGATTGCACGCTATTGCCGTGCCG
TGGTGCTGCTCGGTCGTGATGCGCAACGTCTTGCGGACGCGCTGGCCGATGCCACCACCCTGGTTCATGTCGCAACACTG
GGCGAAGCCGTGCAGCGCGCCGCCGAGTGTGCCGAAGCGGGCGATGCGGTATTGCTGTCGCCGGCCTGTGCCAGTCTGGA
CATGTACAAGAATTTCGAAGAGCGCGGTCGCCTGTTCGCCGCTGCGGTGGAGGCGCTCGACTGA

Protein sequence :
MLIASDQFRIVVGLGKSGMSLVRHLARRGLPFAVADTRVNPPELATLKAEYPDVQVRCGELDVEFLCTASELLVSPGLAV
STPALQEAAARGVKLSGDIELFAREAKAPIIAITGSNAKSTVTTLVGEMAVAAGRTVAVGGNLGTPALDLLADDVELYVL
ELSSFQLETTEQLNAEVATCLNISEDHMDRYSGLPAYHQAKHRIFRGARQVVVNRDDRLSRPLVADDLPTWTFGLGKPDF
KGFGLFEEKGEKYLAFQFDALMPVRELKMRGAHNQSNALAALALGHAVGLPFEPMLETLRQFVGLPHRCQWVGQRGDVSY
YDDSKATNVGAALAAIEGLGADIDGKLVLIAGGDGKGADFSALRAPIARYCRAVVLLGRDAQRLADALADATTLVHVATL
GEAVQRAAECAEAGDAVLLSPACASLDMYKNFEERGRLFAAAVEALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 9e-85 55
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 9e-85 55