Gene Information

Name : xerD (A458_15775)
Accession : YP_006458803.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3417981 - 3418877 bp
Length : 897 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCCTGCACTCGACGACCCCATCATCGACCGTTACCTCGATGCGCTCTGGCTGGAAAAAGGGCTGGCGGACAATAGCCG
CGAGGCCTACCGCAGCGACCTCGCATTGTTCAACGGCTGGCTGGAGGGGCGAGGCGTTCGACTTGCCACCGCCGGGCGCG
AGATCATTCTCGATCACCTCGCATGGCGTCTGAACAATGGTTACAAGGCGCGCTCCACGGCGCGCTTTCTGTCAGGCTTA
CGGGGCTTTTATCGCTACCTGTTACGCGAGGGCGAGATCGCCGTCGATCCGACGTTGCGCGTGGATCTGCCACGGCTTGG
ACGTCCCTTGCCGAAAGCACTGTCCGAAGCCGATGTAGAGGCATTGCTGACGGCGCCAGATATTGGAGAGCCGTTAGGTC
TGCGTGATCGCGCCATGCTCGAAGTGCTTTATGCCTGCGGGTTGCGGGTTACCGAGTTGATCAGCCTGACGCTCGAGCAG
GTCAGCATGCGCCAGGGCGTCGTGCGAACGTTCGGCAAAGGCAATAAAGAGCGTCTTGTGCCGCTTGGCGATGAAGCTTT
GCACTGGCTGGAGCGTTATCAGCGCGATGGTCGTGAACTCTTGCTGTCGGGCAAGGCCAGTGATGTACTGTTTCCCAGTC
AGCGCGGTGGCCAGATGACACGCCAGACCTTCTGGCACCGGATCAAGCTGCACGCGAAGGTCGCCGGTGTCGCCGCATCG
ATTTCACCGCATACCTTGCGCCACGCTTTCGCCACGCACTTGCTCAACCATGGCGCGGATCTGCGCACCGTGCAGATGTT
GCTTGGTCACAGCGACCTGTCGACCACTCAGATCTACACCCACATTGCGCGAGCGCGGTTGCAGGAGTTGCATGCGGCGC
ACCATCCACGCGGCTAG

Protein sequence :
MPALDDPIIDRYLDALWLEKGLADNSREAYRSDLALFNGWLEGRGVRLATAGREIILDHLAWRLNNGYKARSTARFLSGL
RGFYRYLLREGEIAVDPTLRVDLPRLGRPLPKALSEADVEALLTAPDIGEPLGLRDRAMLEVLYACGLRVTELISLTLEQ
VSMRQGVVRTFGKGNKERLVPLGDEALHWLERYQRDGRELLLSGKASDVLFPSQRGGQMTRQTFWHRIKLHAKVAGVAAS
ISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHAAHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-62 61
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-62 61