|
Name : A458_15675 (A458_15675) Accession : YP_006458783.1 Strain : Pseudomonas stutzeri CCUG 29243 Genome accession: NC_018028 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3396002 - 3397726 bp Length : 1725 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGACCGCGCAAGACATGCGCCAGCGCAAGATTCGTCTCGGCGATCTGCTGGTCCAGGCCGGCCTGATCAGCGAGGCGCA GCTGCAGCAGGCGCTGCAGGACCAGAAGCGCACCGGCTCCAAGCTCGGGCGCACGGTACTGGACCTCGGCTTCATCGACG AAGGCCGCCTGCTGCGTGCGCTGTCCGAGCAGCTGCAGATTCCCTTCGTCGAACTCAAGCACTACAAGTTTGACAACCAG CTGACCCAGAGCCTGCCCGAGGCGGTCGCCCGGCGCTTCCGGGTGATAGTGCTGTCCCGCCAGGGCGATGGTTTGCTGGT GGGCATGACCGACCCGCTGGACATCTTCGCCCAGGACGAGATCGAGCGCCTGCTCGGCAAGCGCGTCCACCCGGCGGTGG TGCGTGAAAGCGAGCTGCTCGGCGCGCTGGACCAGCTTTACCGCCGTACCAGTGAGATCGCCTCGCTGGCCGGCGAGCTG GAAGGTGAGCTGCAGGAAAGCGACTTCGACCTCTCGCGCCTCGGCGAAAGCAACAGCGATGCGCCGGTGGTGCGCCTGCT GCAGACGCTGTTCGAGGACGCCGTGCAGATGAAGGCCTCGGACATTCACATCGAACCGGACGAAGGCGTGGTGCGGATTC GCCAGCGTATCGACGGCGTGCTCAACGAACAGGTGATGAAGGAGCACCGTGTGGCTTCGGCGCTGGTCATGCGCCTGAAG ATCATGTCCGGCCTGGATATCTCGGAAAAACGCCTGCCGCAGGACGGCCGTTTCAACATCCGCGTGAAAAACCGCAACCT CGATGTGCGGGTTTCCACCATGCCGGTGCAGTTCGGCGAATCGGTGGTCATGCGTCTGCTCGACCAGAGCGGCGCGATGT TCAAACTCGAAGGTACCGGCATGCCGCCGGCGATGCTCGAGCGCTTCCGGCGCCTGTTGCAGCGTCCGCACGGCATGGTG CTGGTCACCGGCCCGACCGGCTCGGGCAAGACCACCACGCTCTACGCCGGGCTTTCCGAGCTGAACAGCCCGGAGAAGAA GATCATCACCGTCGAGGACCCGGTGGAGTACCGCCTGCCGCGAGTTAATCAGGTGCAGGTCAATGCCAAGATCGAGTTGA CCTTCGCCCGCGTGCTGCGCGCCGCCTTGCGTCAGGACCCGGACATCGTCCTGGTTGGTGAGATCCGTGATCAGGAAACC GCCGAGATCGGCCTGCGCGCCGCACTGACCGGCCACCTCGTACTCTCGACGCTGCACACCAACGATGCCCTGACCTCCGC CATGCGCCTGATCGACATGGGCGTCGAGCCCTTCCTCGTCGCCACCGCGCTGAATGCGGTGCTGGCCCAGCGTCTGATAC GCCGCGTGTGCGAGAACTGCATGGAGGACGATCAGCCCGATCCTCGGCAACTGGCCTGGCTGGAAGCGCTGCACGGCGGC TCGCTGCGCGACCACCGCTTCAAGCGCGGCACTGGTTGTCATCAATGCCACAACAGTGGCTATGCCGGCCGTGTCGGCGT GTACGAGCTGCTGGAGCTGGACGAACCGATGATCGCCGCATTGCGTCGAGGCGATCCTCAGGGCTTCGCCGAGGCCGCGC GCCAGCAGGCGCACTATCGACCACTGGCGGCGTGCGCGCTGGATTATGCCATCGCCGGCGTCACCAGTATCGAAGAGGTG CTGAAGGTCTGCGCCACCCTGGCGGACGACGAGGTGATCGCGTGA Protein sequence : MTAQDMRQRKIRLGDLLVQAGLISEAQLQQALQDQKRTGSKLGRTVLDLGFIDEGRLLRALSEQLQIPFVELKHYKFDNQ LTQSLPEAVARRFRVIVLSRQGDGLLVGMTDPLDIFAQDEIERLLGKRVHPAVVRESELLGALDQLYRRTSEIASLAGEL EGELQESDFDLSRLGESNSDAPVVRLLQTLFEDAVQMKASDIHIEPDEGVVRIRQRIDGVLNEQVMKEHRVASALVMRLK IMSGLDISEKRLPQDGRFNIRVKNRNLDVRVSTMPVQFGESVVMRLLDQSGAMFKLEGTGMPPAMLERFRRLLQRPHGMV LVTGPTGSGKTTTLYAGLSELNSPEKKIITVEDPVEYRLPRVNQVQVNAKIELTFARVLRAALRQDPDIVLVGEIRDQET AEIGLRAALTGHLVLSTLHTNDALTSAMRLIDMGVEPFLVATALNAVLAQRLIRRVCENCMEDDQPDPRQLAWLEALHGG SLRDHRFKRGTGCHQCHNSGYAGRVGVYELLELDEPMIAALRRGDPQGFAEAARQQAHYRPLAACALDYAIAGVTSIEEV LKVCATLADDEVIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-83 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-83 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A458_15675 | YP_006458783.1 | type II secretion system protein E | VFG1876 | Protein | 3e-88 | 47 |
| A458_15675 | YP_006458783.1 | type II secretion system protein E | VFG0182 | Protein | 7e-85 | 45 |
| A458_15675 | YP_006458783.1 | type II secretion system protein E | VFG2048 | Protein | 8e-83 | 42 |
| A458_15675 | YP_006458783.1 | type II secretion system protein E | VFG0112 | Protein | 3e-80 | 41 |
