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Name : lysS (A458_14445) Accession : YP_006458541.1 Strain : Pseudomonas stutzeri CCUG 29243 Genome accession: NC_018028 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3145151 - 3146653 bp Length : 1503 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCGAACAACCGCTGAACCAGCACGCCATCCAAGAGGAAGAAAACAAGCTGATTGCCCAGCGCAAGGAAAAGCTTGC TGCCGTGCGCGAGCAGGGCAATGCCTTCCCCAATGACTTCCGTCGCGACCGCTATGCAGGCGACCTGCAGAAACAGTACG CCGAGAAGACCAAGGAGGAGCTGGAGGCGGCCGCCATTCCGGTCAAGGTCGCCGGGCGCATCATGCTCAACCGCGGGCCG TTCATGGTGCTGCAGGATATGAGCGGGCGCATCCAGGTCTATGTCGATCGCAAGACGCTGCCTGCCGAGCAGGTCGAGGC GGTCAAGCACTTCGACCTGGGCGACATCATTGCCGCCGAGGGTACCCTCGCTCGTTCCGGCAAGGGCGACCTGTACGTCT ACATGAACAGCGTGCGTCTGCTGACCAAGTCGCTGCGTCCGCTGCCGGACAAGTTCCACGGCCTGACCGACACCGAGCAG CGCTATCGCCAGCGCTACGTCGACCTGATGGTCAACGAGGAGGTGCGTGAAACGTTCCGTGTGCGCTCCCAGGTCATCTC GCATATCCGCAAGTTCCTCGCCGAGCGTGACTTCCTCGAAGTCGAAACGCCGATGCTGCAGACCATTCCCGGAGGCGCTG CGGCCAAACCGTTCGAGACCCATCACAACGCGCTGGACATGCCGATGTTCCTGCGCATCGCGCCGGAGCTCTACCTCAAG CGTCTGGTGGTCGGTGGCTTCGAGCGCGTGTTCGAGATCAACCGCAACTTCCGCAACGAAGGCGTCTCGACCCGGCACAA CCCCGAGTTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTACGAAGACAACATGGATCTCACCGAGGAGCTGTTCC GCGAGCTGGCCGAGGCCGTGCTCGGCAGCACCGACGTGCCCTACGGCGACAAGGTGTTCCACTTCGGCGAGCCCTTCGCG CGGCTGTCGGTGTTCGACTCGATCCTCAAGTTCAACCCGGAAATCTCCGCGGATGACCTGAACGACGTCGAGAAGGCTCG CGCCATCGCCAAGAAGGCCGGCGCCAAGCTGCTCGGCCACGAAGGGCTGGGCAAGCTGCAGGTGATGATTTTCGAGGAGC TGGTCGAGCACAAACTGGAACAGCCAACCTTCATCACTGAATACCCGTTCGAAGTCTCGCCGCTGGCCCGACGCAACGAT CGCAACCCCAACGTCACCGACCGCTTCGAACTGTTCATTGGTGGCCGCGAGATCGCCAACGCCTATTCCGAGCTCAACGA TGCCGAGGATCAGGCCGAACGTTTCCACGCGCAGGTAGCCGACAAGGATGCCGGCGATGACGAAGCCATGCACTTCGACG CCGACTTCGTGCGTGCGCTGGAATACGGCATGCCGCCGACCGCGGGCGAGGGTATCGGCATCGATCGCCTGGTGATGCTG CTGACCAACTCGCCTTCGATCCGCGACGTGATCCTCTTCCCGCACATGCGTCCGGAACTCTGA Protein sequence : MSEQPLNQHAIQEEENKLIAQRKEKLAAVREQGNAFPNDFRRDRYAGDLQKQYAEKTKEELEAAAIPVKVAGRIMLNRGP FMVLQDMSGRIQVYVDRKTLPAEQVEAVKHFDLGDIIAAEGTLARSGKGDLYVYMNSVRLLTKSLRPLPDKFHGLTDTEQ RYRQRYVDLMVNEEVRETFRVRSQVISHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLK RLVVGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAEAVLGSTDVPYGDKVFHFGEPFA RLSVFDSILKFNPEISADDLNDVEKARAIAKKAGAKLLGHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARRND RNPNVTDRFELFIGGREIANAYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-130 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 8e-78 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006458541.1 | lysyl-tRNA ligase | VFG1668 | Protein | 6e-131 | 59 |
