Gene Information

Name : fliP (A458_13650)
Accession : YP_006458384.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2987163 - 2987939 bp
Length : 777 bp
Strand : -
Note : COG1338 Flagellar biosynthesis pathway, component FliP

DNA sequence :
ATGTTGCGCATTCTGCTGGTGGTCACGCTGATGTTGCTCGGCCCGCTCGCCATGGCGCAGGAGCCTTCCGGCATCCTGGC
CCAGGGAAACAACCCGCTCTCGATTCCGGCGATCACTCTGACCACCGACGCGGAAGGACAGCAGGAATACTCGGTCAGCC
TGCAGATTCTGCTGATCATGACGGCGCTGAGCTTCATTCCGGCGTTCGTCATGCTGATGACCAGCTTCACCCGCATCATC
ATCGTGTTTTCCATCCTGCGTCAGGCGCTTGGCCTGCAGCAGACACCGTCGAACCAGATCCTCATCGGTCTGACCCTGTT
CCTCACGCTATTCATCATGGCGCCGGTGTTCGAGCGGATTAACCAGGAAGCGCTTCAGCCTTATCTCAGCGAGCAGATCC
CGGCGCAGGAAGCGATCGCCCGGGCCGAGGTGCCGCTCAAGGGCTTCATGCTGGCGCAGACCCGCGAGAGCGATCTGGAG
CTGTTCGTCAGGCTGTCACGACGCACCGATATCGCATCGCCGGAAGCTGCACCGATGACCATCCTGGTGCCGGCATTCGT
CACCTCCGAGCTGAAGACGGCGTTCCAGATCGGCTTCATGATCTTCATTCCCTTCCTGATCATCGACATGGTGGTGGCCA
GCGTGCTCATGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATCTCGTTGCCGTTCAAGATCATGCTGTTCGTGCTG
GTGGACGGCTGGGGTCTGATCATCGGCACGCTGGCCGGTAGCTTCGGCACGCTTTAG

Protein sequence :
MLRILLVVTLMLLGPLAMAQEPSGILAQGNNPLSIPAITLTTDAEGQQEYSVSLQILLIMTALSFIPAFVMLMTSFTRII
IVFSILRQALGLQQTPSNQILIGLTLFLTLFIMAPVFERINQEALQPYLSEQIPAQEAIARAEVPLKGFMLAQTRESDLE
LFVRLSRRTDIASPEAAPMTILVPAFVTSELKTAFQIGFMIFIPFLIIDMVVASVLMAMGMMMLSPLIISLPFKIMLFVL
VDGWGLIIGTLAGSFGTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-27 42
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 3e-27 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 3e-27 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 2e-27 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 4e-27 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 4e-27 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 4e-25 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 4e-25 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006458384.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-87 87
fliP YP_006458384.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-62 61
fliP YP_006458384.1 flagellar biosynthesis protein FliP VFG2494 Protein 4e-57 59
fliP YP_006458384.1 flagellar biosynthesis protein FliP VFG2338 Protein 8e-54 58
fliP YP_006458384.1 flagellar biosynthesis protein FliP VFG0519 Protein 1e-27 41
fliP YP_006458384.1 flagellar biosynthesis protein FliP VFG0394 Protein 5e-28 41