Gene Information

Name : A458_10320 (A458_10320)
Accession : YP_006457724.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator GacA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2245783 - 2246427 bp
Length : 645 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
TTGATTAGGGTGCTGGTGGTCGATGACCACGATCTGGTTCGCACGGGCATCAGTCGCATGCTGGCGGACATCTCCGGTCT
TCAGGTGATAGGCCAGGCGGATTCCGGCGAAGACGCCATCCGCAAGGCGCGGGAACTGAAGCCTGATGTGGTGCTGATGG
ACGTCAAGATGCCGGGCATCGGTGGCCTCGAGGCGACCCGCAAGCTGCTGCGCAGCTACCCCGATCTGAAGGTCATCGCT
GTGACCATATGTGAAGAAGACCCTTTCCCGACGCGCCTCCTGCAGGCTGGCGCCGCGGGTTATCTGACCAAAGGTGCGGC
GCTGGAGGAAATGGTGCAGGCCATTCGCATGGTATTTGGTGGTCAGCGCTACATCAGCCCGCAGATCGCCCAGCAACTGG
CGCTCAAATCCTTCCAGCCGCAGCTCAGCGAATCGCCATTCGATCTGCTCTCGGAGCGGGAAATCCAGATCGCATTGATG
ATCGCCAACTGCCAGAAGGTGCAGAGCATCTCCGACAAGCTCTGTCTCTCGCCGAAAACAGTCAACACCTACCGTTATCG
CATCTTCGAAAAGCTGTCGATTACCAGTGATGTCGAGCTTGCCCTGCTGGCGGTTCGCCACGGGATGGTCGACACCGTCA
ACTGA

Protein sequence :
MIRVLVVDDHDLVRTGISRMLADISGLQVIGQADSGEDAIRKARELKPDVVLMDVKMPGIGGLEATRKLLRSYPDLKVIA
VTICEEDPFPTRLLQAGAAGYLTKGAALEEMVQAIRMVFGGQRYISPQIAQQLALKSFQPQLSESPFDLLSEREIQIALM
IANCQKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDTVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 5e-52 58
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 5e-52 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_10320 YP_006457724.1 DNA-binding response regulator GacA VFG1889 Protein 1e-49 55