|
Name : A458_08065 (A458_08065) Accession : YP_006457282.1 Strain : Pseudomonas stutzeri CCUG 29243 Genome accession: NC_018028 Putative virulence/resistance : Virulence Product : reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 1742804 - 1744072 bp Length : 1269 bp Strand : + Note : COG3344 Retron-type reverse transcriptase DNA sequence : ATGAGTGGCGTGAGCTCGGCGAAACCTTATGACATAGCGAAACGCACGGTATGGGACGCCTACCAGCAGGTCAGGGCCAA CCGCGGTGCTGCCGGCATCGACGATGAAACCATCGCCGATTTCGAGCGGGATCTGTCTAAGAATCTCTACAAGCTGTGGA ATCGGATGTCGTCGGGGTCGTACTTCCCGCCTCCGGTCAAGCAAGTAGAAATTCCCAAGGCATCGGGAGGCACGCGCAAG CTGGGAGTGCCCACGGTTGGTGATCGTGTCGCGCAAACCGTGGTCAAGCTTCTCATCGAGCCGGAGCTGGACTCGATCTT CCACTCGGACTCCTATGGGTACCGGCCGGGACGATCAGCGAAGCAGGCGGTGGCGATCACGCGTGAGCGCTGCTGGCGAT ACGACTGGGTGGTGGAGTTTGATATCAAGGCAGCCTTCGATCAGATCAATCATGGGTTGCTGATGAAGGCGGTGCGCCTG CACATCAAGGAGGACTGGATACTTCTGTACATCGAGCGGTGGCTGGTTGCGCCGTTCGAAACGGATCACGGTATGCGCGT CCGACGCGAACGCGGCACCCCGCAAGGTGGAGTGATCAGTCCCCTCCTGATGAATCTGTTCATGCACTATGCCTTCGACA CCTGGATGCAACGTACCAGCCCCAACTGCCCGTTTGCCCGCTACGCCGATGATGCGGTGGTGCACTGCCGCAGTCGAAAG CAAGCGGAGTACGTGATGCGCTCCATTGCTTCACGGCTGGCTGCCTGTGGCTTGACGATGCACCCCGAGAAATCGAAGGT CGTGTACTGCAAGGACAGTAACCGTCGCGCAGGTTATCCGCATGTGAGCTTTACCTTCCTCGGCTTCACCTTTAGGCCGA GGAAGGCGCTCAGCAAACAAGACCAGCTCTTCACGAGCTTCCTTCCGGGAGCGAGTGCGGATGCCTTAAAGCGGATGCGG CAAGCGGTACGCAGGTGGCGACTCAATCGCCAAACCCACGTGACGCTGGTCGACGTGGCTCGGCTCTACAATCCAGTGAT ACAGGGGTGGTCGCAATACTATGGCTCGTTCTATCGGACAGCCATGCTTGGCATCTTCCAGCACATTGACCGCGCGCTTG AACGCTGGGCCCGACGAAAATACAAGGCTCTTCATAGGCGCAAGCGGCGCATTAGCCAATGGCTGGACAAGATGCGGACT GTGGTACCCCGGCTGTTTCATCACTGGCGAGTGACCGGGCAGCAAGGTTGGATAACGGGAGCCGTATGA Protein sequence : MSGVSSAKPYDIAKRTVWDAYQQVRANRGAAGIDDETIADFERDLSKNLYKLWNRMSSGSYFPPPVKQVEIPKASGGTRK LGVPTVGDRVAQTVVKLLIEPELDSIFHSDSYGYRPGRSAKQAVAITRERCWRYDWVVEFDIKAAFDQINHGLLMKAVRL HIKEDWILLYIERWLVAPFETDHGMRVRRERGTPQGGVISPLLMNLFMHYAFDTWMQRTSPNCPFARYADDAVVHCRSRK QAEYVMRSIASRLAACGLTMHPEKSKVVYCKDSNRRAGYPHVSFTFLGFTFRPRKALSKQDQLFTSFLPGASADALKRMR QAVRRWRLNRQTHVTLVDVARLYNPVIQGWSQYYGSFYRTAMLGIFQHIDRALERWARRKYKALHRRKRRISQWLDKMRT VVPRLFHHWRVTGQQGWITGAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 0.0 | 99 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 3e-88 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A458_08065 | YP_006457282.1 | reverse transcriptase | VFG1512 | Protein | 2e-88 | 44 |
