Gene Information

Name : A458_07825 (A458_07825)
Accession : YP_006457234.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Unknown
Product : putative transposase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1686784 - 1687626 bp
Length : 843 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence : 
TTGCAGATTGCCCCGTCCGGTTACCGCAGGCACGCGGCGCAGCAGCGCAACCCGGCACTGCGCTGTTGCCGTGCTCGGCG
CGATGATGCGTTGATCCCGGAAATCCAGCGCGTGTGGGATGCCAACATGCAGTGCTATGGCGCGATGAAAGTCTGGAAGC
AGCTCAGGCGAGAAGGCATCGCAGCGGCCAGATGCACGGTGGAGCGGTTGATGCGTCAGGTTGGGTTGCAGGGCATAAGG
CGCGGCCAGATCGTGCGGACAACGGTGGCCGGTGATAAGGCCATCTGCCCGCTGGATCGTGTCCAGCGGCAGTTCCATGC
CGAGCGTCCCAATCAGCTGTGGGTATCGGACTTCACGTACGTATCGACCTGGCAAGGCTGGCTGTACGTGGCCTTCGTGA
TCGACGTGTTTGCGCGGCGGATCGTCGGCTGGCGAGTCAGTACCAGCATGAAGACCGACTTCGTGCTGGATGCCCTGGAG
CAGGCGCTGTATGCCCGTCAGCCATATCGTACGGGTGGTCTGATCCATCACAGCGACCGCGGCAGCCAGTACGTCTCGAT
TCGCTATACCGAGCGACTGGCAGAGGCCGGCATTGAGCCTTCGGTTGGCAGCAAGGGCGACAGCTACGACAACGCATTGG
CCGAAACCATCAACGGTCTGTACAAGGCCGAACTGATTTACCGCCAGTCGTGGAAGAGCCGCGAAGCTGTTGAGATGGCG
ACCTTGAAATGGGTGCACTGGTACAACCACCAGCGGCTGTTGAGCTCAATCGGCTATATCCCGCCTGCGGAGGCTGAGGC
AAACTTCTACCAGCAACAAGCAGGTCAGGCCATGGCTGCCTGA

Protein sequence : 
MQIAPSGYRRHAAQQRNPALRCCRARRDDALIPEIQRVWDANMQCYGAMKVWKQLRREGIAAARCTVERLMRQVGLQGIR
RGQIVRTTVAGDKAICPLDRVQRQFHAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSTSMKTDFVLDALE
QALYARQPYRTGGLIHHSDRGSQYVSIRYTERLAEAGIEPSVGSKGDSYDNALAETINGLYKAELIYRQSWKSREAVEMA
TLKWVHWYNHQRLLSSIGYIPPAEAEANFYQQQAGQAMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 3e-63 67
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 9e-63 66
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 3e-59 65
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-70 65
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 6e-71 64
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-71 64
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-71 63
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-69 63
Z1198 NP_286733.1 transposase Not tested TAI Protein 6e-71 63
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-68 63
Z1638 NP_287141.1 transposase Not tested TAI Protein 6e-71 63
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-68 63
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-71 63
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-68 63
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-71 63
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-68 63
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-72 63
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-72 63
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-71 63
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-68 62
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 7e-71 62
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-46 62
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 7e-48 48
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 9e-30 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_07825 YP_006457234.1 putative transposase subunit B VFG1602 Protein 7e-69 62