Gene Information

Name : A458_06465 (A458_06465)
Accession : YP_006456962.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1424454 - 1424936 bp
Length : 483 bp
Strand : -
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
GTGAGCAAGCTGTTCACCGACAAGGCCTCGGGCAAGGATAATCAGCGCCCGCAACTGGAGGCGTTGCTGAGCTTCGTCCG
TGAGGGCGACACCGTGGTGGTGCATAGCATGGATCGTCTGGCGCGCAACCTCGATGACCTGCGCCGCCTGGTGCAGAAGC
TGACCCAGCGCGGCGTGCGCATCGAGTTCCTGAAGGAGGGCTTGGTGTTCACGGGCGAGGACTCCCCGATGGCCAACCTG
ATGCTATCTGTGATGGGGGCCTTCGCTGAGTTCGAGCGCGCCTTGATCCGTGAGCGGCAGCGCGAGGGCATCGCCTTGGC
CAAGCAGCGCGGCGCGTACCGAGGCCGCAAGAAAGCCCTGTCCGATGAGCAGGCTGCTACCCTGCGGCAGCGAGCGACGG
CCGGCGAGCCCAAGGCGCAGCTCGCCCGTGAATTCAACATCAGCCGGGAAACCCTCTACCAGTACCTCCGCACGGACGAC
TGA

Protein sequence :
MSKLFTDKASGKDNQRPQLEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGEDSPMANL
MLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRATAGEPKAQLAREFNISRETLYQYLRTDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 5e-60 95
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-51 83
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-51 83
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-51 83
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-51 81
res YP_005124341.1 DNA-invertase Not tested Not named Protein 3e-18 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_06465 YP_006456962.1 resolvase VFG1030 Protein 6e-52 83