Gene Information

Name : A458_06460 (A458_06460)
Accession : YP_006456961.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Unknown
Product : transposase for transposon Tn1721
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1421483 - 1424293 bp
Length : 2811 bp
Strand : -
Note : COG4644 Transposase and inactivated derivatives, TnpA family

DNA sequence :
GTGCAACTCTGCCTGCTGCGCTTCCCCGGCTATGCGTTGGGCACCGACAGCGAGCGGCCCGAGCCGGTGATCCTGTGGGT
GGCCAAGCAAGTCCAGACCGATCCGGCGAGTTGGGAGAAGTACGGCGAGCGCGACGTGACCCGTCGCGAGCACGCCCAGG
AACTGCGCACCTACCTGCAACTGGCCCCGTTCGGCCTGTCCGACTTCCGCGCCCTGGTGCGCGAGCTGACCGAACTGGCC
CAGCAGACCGACAAGGGCTTGCTGCTGGCCGGTCAGGCGCTGGAGAGCCTGCGGCAGAGGCGACGCATCCTGCCGGCGTT
GAGCGTGATCGACCGGGCTTGCTCGGAGGCCATTGCGCGGGCCAATCGGCGGGTCTACCGCGCCCTGGTCGATCCACTTA
CGGACTCGCATCGGGCCAAGCTGGACGAGCTGTTGACGCTCAAGGCCGGCAGCAGCATCACCTGGTTGACCTGGCTGCGA
CAGGCACCGCTGAAACCCAACTCCCGGCACATGCTTGAACACATCGAGCGGCTGAAGACATTTCAGCTGGTGGACTTGCC
CGAAGGCCTGGGCCGGCACATCCATCAGAACCGCCTGCTCAAGCTGGCCCGCGAGGGTGGGCAGATGACACCCAAGGACC
TCGGCAAGTTCGAGCCTCAGCGACGCTACGCGACCCTGGCCGCGGTGGTGCTGGAGAGCACCGCGACTGTGATTGATGAG
TTGGTCGATCTGCACGACCGTATCCTGGTCAAGCTGTTCAGCAGCGCGAAGCACAAGCATCAGCAGCAGTTCCAGAAACA
GGGCAAGGCGATCAACGACAAGGTGCGCCTGTATTCGAAGATCGGCCAGGCGCTGCTGGAGGCCAAGGAAAGCGGCAGCG
ACCCCTATGCAGCCATCGAAGCGGTGATACCTTGGGACGAGTTCACCGAGAGCGTCAGCGAGGCCGAGCTGCTTGCCCGG
CCGGAAGGCTTTGACCATCTGCACCTGGTCGGCGAGAACTTCGCCACTCTGCGCCGTTACACGCCGGCCTTGCTGGAGGT
GCTGGAACTGCGCGCTGCGCCGGCCGCGCAAGGCGTGCTGGCAGCCGTGCAGACCCTGCGCGAGATGAACGCCGACAGCC
TGCGCAAGGTGGCGGCCGATGCACCAACGGCCTTCATCAAGCCCCGCTGGAAGCCGCTGGTGATCACCCTGGAAGGCAAC
GACCGGCGCTTCTATGAAATCTGCGCGCTTTCCGAGCTGAAGAACGCCCTGCGCTCCGGCGACATCTGGGTCAAGGGCTC
GCGGCAGTTCCGTGACTTCGACGACTTCCTGCTGCCGGCAGAGAAGTTCGCCACGCTCAAGCGGGAACAGGCCCTGCCCC
TGACGATCAATCCCAACAGCGACCAGTATCTGGAAGAGCGATTGCCGCTGCTGGACGAGCAGTTGGCCACCGTCATCCGC
CTGGCCAAGGACAACGAGATGCCCGAGGCCATCCTCACCGAGTCCGGGCTGAAGATCACCCCGCTGGATTCAGCGGTGCC
AGATCGTGCGCAGGCGCTGATCGACCAGACCAGCCAGTTACTGCCGCGCATCAAGATCACCGAACTGCTGATGGACGTTG
ACGACTGGACGGGCTTCAGCCGCCACTTTACCCACTTGAAGGACGGGGCCGAGGCCAAAGACCGGACGTTGCTGCTGTCC
GCGATCCTCGGTGATGCAATCAACCTCGGGCTGACCAAGATGGCCGAGTCGAGCCCCGGCCTGACCTACGCCAAGCTGTC
CTGGCTGCAAGCCTGGCACATCCGAGACGAAACCTACTGGGCGGCCCTGGCCGAGCTGGTCAACCACCAGTTCCGTCATA
CCTTCGCCGCTCACTGGGGCGACGGCACGACCTCTTCGTCCGATGGCCAGCGCTTCCGGGCGGGCGGCCGGGGCGAAAGC
ACCCGGCACGTCAACCCGAAGTACGGCAGCGAGCCGGGCCGGCTGTTCTACACCCACATCTCCGACCAGTACGCGCCATT
CAGCACCCGCGTGGTGAATGTCGGCGTGCGCGATTCCACCTACGTGCTCGATGGCCTGCTGTACCACGAGTCCGACTTGC
GGATCGAGGAGCACTACACCGACACGGCCGGCTTCACCCATCACGTCTTCGCCCTAATGCACCTGCTGGGCTTCCGCTTC
GCACCACGCATCCGCGACCTCGGCGAAACCAAACTGTATGTGCCGCAGGGCGTGCATGCCTACCCGGCGCTGCGCCCGCT
GATAGGAGGCACCCTGAACATCAAGCACGTCCGTGCCCATTGGGATGACATCCTGCGCCTGGCCAGCTCGATCAAGCAGG
GCACCGTCACCGCCTCGCTGATGCTGCGCAAGCTCGGCAGCTATCCGCGCCAGAATGGCCTGGCCGTCGCCCTGCGCGAA
CTGGGCCGGATCGAACGCACGCTGTTCACCCTGGACTGGTTGCAAAGTGTTGAGCTGCGCCGCCGCGTGCATGCCGGCCT
GAACAAAGGTGAGGCTCGCAACTTGCTGGCTAGGGCGGTGTTCTTCAACCGCCTTGGGGAAATCAGGGATCGGAGCTTCG
AGCAGCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGGCCGCCATCGTGCTGTGGAACACGGTGTACCTGGAGCGC
GCCACCCAGGGACTGGTCGAAGCCGGCAAGCCGGTGGACGGCGAGCTGCTGCAATACCTGTCGCCGCTGGGCTGGGAGCA
CATCAACCTGACCTGCGATTACGGCTGGCGGCAGAGCCGCAGGCTGGAAGACGGGAAGTTCAGGCCGCTACGGTTGCCTG
GAAAACCTTAG

Protein sequence :
MQLCLLRFPGYALGTDSERPEPVILWVAKQVQTDPASWEKYGERDVTRREHAQELRTYLQLAPFGLSDFRALVRELTELA
QQTDKGLLLAGQALESLRQRRRILPALSVIDRACSEAIARANRRVYRALVDPLTDSHRAKLDELLTLKAGSSITWLTWLR
QAPLKPNSRHMLEHIERLKTFQLVDLPEGLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYATLAAVVLESTATVIDE
LVDLHDRILVKLFSSAKHKHQQQFQKQGKAINDKVRLYSKIGQALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLAR
PEGFDHLHLVGENFATLRRYTPALLEVLELRAAPAAQGVLAAVQTLREMNADSLRKVAADAPTAFIKPRWKPLVITLEGN
DRRFYEICALSELKNALRSGDIWVKGSRQFRDFDDFLLPAEKFATLKREQALPLTINPNSDQYLEERLPLLDEQLATVIR
LAKDNEMPEAILTESGLKITPLDSAVPDRAQALIDQTSQLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLS
AILGDAINLGLTKMAESSPGLTYAKLSWLQAWHIRDETYWAALAELVNHQFRHTFAAHWGDGTTSSSDGQRFRAGGRGES
TRHVNPKYGSEPGRLFYTHISDQYAPFSTRVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTHHVFALMHLLGFRF
APRIRDLGETKLYVPQGVHAYPALRPLIGGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRE
LGRIERTLFTLDWLQSVELRRRVHAGLNKGEARNLLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLER
ATQGLVEAGKPVDGELLQYLSPLGWEHINLTCDYGWRQSRRLEDGKFRPLRLPGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 95
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 95
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 73
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 72
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_06460 YP_006456961.1 transposase for transposon Tn1721 VFG1031 Protein 0.0 70