Gene Information

Name : A458_06255 (A458_06255)
Accession : YP_006456920.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Unknown
Product : lytic transglycosylase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1376650 - 1377270 bp
Length : 621 bp
Strand : +
Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence : 
ATGGCAGCGGCAATAGGTGCTCCGGGCCGGGAGCGTCGGCCGTCCCGCATCGCCATCCGCTGCGCCAGCGCCATGCTGCT
GCTCACCACCGGCGGCTGGGCATTGGCCGCCCTGGCGCGGGAAGTGCCGCCGCCGGCCTATCAACTGGCGGCGCACCGTG
CAGACGTGCCGGCGGCGGTGCTGTACGCGGTGGCCTTGCAGGAGAGCGGCGCCATGCTGCGCGGGCGCCTGATCCCCTGG
CCGTGGACGCTCAACGTCGCCGGCTCGCCACAGCGCTATGCCACCCGCGCCGAGGCCTGCGCGGGGCTGCACCGTGCCCT
CGCTCACACGCCGGCCAATCGCATCGACGCCGGCCTCGGCCAGGTCAATCTCGGCTACCACGCGCATCGCTACACGCAGC
CCTGCGAGCTGCTGGACCCGTACCGCAACCTCGCCATCGCTGCGGAAATCCTGCGCGAACAGCACACGCCGGGCGAGGAC
TGGCTGCTTGCCATCGGCCGCTACCACCGGCCCGCCGGCGGGGCACCCGCGGCGCGCTACCGGCGCAGTGTGCATCGGCA
CCTGACCCGCGTGCTCGACCCCGACGTTCCCGTTCCAACCCTCCAGGCCACCACGCCATGA

Protein sequence : 
MAAAIGAPGRERRPSRIAIRCASAMLLLTTGGWALAALAREVPPPAYQLAAHRADVPAAVLYAVALQESGAMLRGRLIPW
PWTLNVAGSPQRYATRAEACAGLHRALAHTPANRIDAGLGQVNLGYHAHRYTQPCELLDPYRNLAIAAEILREQHTPGED
WLLAIGRYHRPAGGAPAARYRRSVHRHLTRVLDPDVPVPTLQATTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-49 76
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 6e-47 73
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-27 54
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-24 54
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 2e-24 54
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 1e-17 47